ENSDARG00000045802


Danio rerio

Features
Gene ID: ENSDARG00000045802
  
Biological name :hapln3
  
Synonyms : hapln3 / hyaluronan and proteoglycan link protein 3
  
Possible biological names infered from orthology : Q80WM5 / Q96S86
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 19201231
Gene end: 19205875
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067322
NCBI entrez gene - 406374     See in Manteia.
RefSeq - NM_213101
RefSeq Peptide - NP_998266
swissprot - F1QVB2
ZFIN ID - ZDB-GENE-040426-2089
Ensembl - ENSDARG00000045802
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HAPLN3ENSGALG00000021135Gallus gallus
 HAPLN3ENSG00000140511Homo sapiens
 Hapln3ENSMUSG00000030606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hapln1b / hyaluronan and proteoglycan link protein 1b / Q9QUP5* / HAPLN1* / P10915* / hyaluronan and proteoglycan link protein 1*ENSDARG0000006851646
hapln2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSDARG0000000390344
hapln4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSDARG0000001854243
hapln1a / hyaluronan and proteoglycan link protein 1aENSDARG0000008976942
bcan / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSDARG0000009941238
ncanb / neurocan b / NCAN* / O14594* / neurocan*ENSDARG0000000578335
vcana / versican a / VCAN* / P13611* / versican*ENSDARG0000010351534
acana / aggrecan a / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000003589133
vcanb / versican b / VCAN* / P13611* / versican*ENSDARG0000000940133
acanb / aggrecan b / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000004579931
CU861477.1 / NCAN* / O14594* / neurocan*ENSDARG0000010012829
stab2 / stabilin 2 / Q8R4U0* / Q8WWQ8* / Stabilin-2 Short form stabilin-2*ENSDARG0000004574818
tnfaip6 / tumor necrosis factor, alpha-induced protein 6 / O08859* / P98066* / TNF alpha induced protein 6*ENSDARG0000009344015
stab1 / stabilin 1 / Q9NY15*ENSDARG0000007648413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007417 central nervous system development IBA
 molecular_functionGO:0005201 extracellular matrix structural constituent IBA
 molecular_functionGO:0005540 hyaluronic acid binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr