ENSDARG00000099412


Danio rerio

Features
Gene ID: ENSDARG00000099412
  
Biological name :bcan
  
Synonyms : bcan / brevican
  
Possible biological names infered from orthology : Brevican core protein / Q61361 / Q96GW7
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 29310145
Gene end: 29334672
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140252
NCBI entrez gene - 334113     See in Manteia.
RefSeq - NM_001083813
RefSeq Peptide - NP_001077282
swissprot - A0A0R4IXT8
ZFIN ID - ZDB-GENE-030131-6045
Ensembl - ENSDARG00000099412
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BCANENSGALG00000045469Gallus gallus
 BCANENSG00000132692Homo sapiens
 BcanENSMUSG00000004892Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acana / aggrecan a / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000003589124
ncanb / neurocan b / NCAN* / O14594* / neurocan*ENSDARG0000000578323
vcanb / versican b / VCAN* / P13611* / versican*ENSDARG0000000940123
vcana / versican a / VCAN* / P13611* / versican*ENSDARG0000010351521
acanb / aggrecan b / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000004579920
CU861477.1 / NCAN* / O14594* / neurocan*ENSDARG0000010012812
hapln3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSDARG0000004580211
stab2 / stabilin 2 / Q8R4U0* / Q8WWQ8* / Stabilin-2 Short form stabilin-2*ENSDARG0000004574810
hapln1b / hyaluronan and proteoglycan link protein 1b / Q9QUP5* / HAPLN1* / P10915* / hyaluronan and proteoglycan link protein 1*ENSDARG0000006851610
stab1 / stabilin 1 / Q9NY15*ENSDARG000000764849
hapln2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSDARG000000039039
hapln1a / hyaluronan and proteoglycan link protein 1aENSDARG000000897699
hapln4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSDARG000000185429
tnfaip6 / tumor necrosis factor, alpha-induced protein 6 / O08859* / P98066* / TNF alpha induced protein 6*ENSDARG000000934405


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000538  Link domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013032  EGF-like, conserved site
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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