ENSDARG00000018542


Danio rerio

Features
Gene ID: ENSDARG00000018542
  
Biological name :hapln4
  
Synonyms : hapln4 / hyaluronan and proteoglycan link protein 4
  
Possible biological names infered from orthology : Q80WM4 / Q86UW8
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 17828267
Gene end: 17831253
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113168
NCBI entrez gene - 559818     See in Manteia.
RefSeq - NM_001044907
RefSeq Peptide - NP_001038372
swissprot - Q1LV25
ZFIN ID - ZDB-GENE-060503-243
Ensembl - ENSDARG00000018542
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HAPLN4ENSGALG00000026563Gallus gallus
 HAPLN4ENSG00000187664Homo sapiens
 Hapln4ENSMUSG00000007594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hapln1b / hyaluronan and proteoglycan link protein 1b / Q9QUP5* / HAPLN1* / P10915* / hyaluronan and proteoglycan link protein 1*ENSDARG0000006851651
hapln3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSDARG0000004580246
hapln1a / hyaluronan and proteoglycan link protein 1aENSDARG0000008976945
hapln2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSDARG0000000390342
ncanb / neurocan b / NCAN* / O14594* / neurocan*ENSDARG0000000578337
vcana / versican a / VCAN* / P13611* / versican*ENSDARG0000010351535
vcanb / versican b / VCAN* / P13611* / versican*ENSDARG0000000940134
bcan / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSDARG0000009941234
acanb / aggrecan b / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000004579932
acana / aggrecan a / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000003589132
CU861477.1 / NCAN* / O14594* / neurocan*ENSDARG0000010012828
tnfaip6 / tumor necrosis factor, alpha-induced protein 6 / O08859* / P98066* / TNF alpha induced protein 6*ENSDARG0000009344015
stab2 / stabilin 2 / Q8R4U0* / Q8WWQ8* / Stabilin-2 Short form stabilin-2*ENSDARG0000004574815
stab1 / stabilin 1 / Q9NY15*ENSDARG0000007648413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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