ENSDARG00000093440


Danio rerio

Features
Gene ID: ENSDARG00000093440
  
Biological name :tnfaip6
  
Synonyms : tnfaip6 / tumor necrosis factor, alpha-induced protein 6
  
Possible biological names infered from orthology : O08859 / P98066 / TNF alpha induced protein 6
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 22764235
Gene end: 22779813
  
Corresponding Affymetrix probe sets: Dr.17738.1.S1_at (Zebrafish Array)   Dr.17738.2.A1_at (Zebrafish Array)   NM_001040243_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000085308
NCBI entrez gene - 678516     See in Manteia.
RefSeq - NM_001040243
RefSeq Peptide - NP_001035333
swissprot - B0UY56
ZFIN ID - ZDB-GENE-060421-2654
Ensembl - ENSDARG00000093440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNFAIP6ENSGALG00000012481Gallus gallus
 P98066ENSG00000123610Homo sapiens
 O08859ENSMUSG00000053475Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vcana / versican a / VCAN* / P13611* / versican*ENSDARG0000010351524
acanb / aggrecan b / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000004579924
acana / aggrecan a / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000003589124
bcan / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSDARG0000009941223
vcanb / versican b / VCAN* / P13611* / versican*ENSDARG0000000940123
ncanb / neurocan b / NCAN* / O14594* / neurocan*ENSDARG0000000578323
hapln3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSDARG0000004580220
hapln1b / hyaluronan and proteoglycan link protein 1b / Q9QUP5* / HAPLN1* / P10915* / hyaluronan and proteoglycan link protein 1*ENSDARG0000006851619
hapln2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSDARG0000000390319
hapln1a / hyaluronan and proteoglycan link protein 1aENSDARG0000008976918
hapln4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSDARG0000001854218
CU861477.1 / NCAN* / O14594* / neurocan*ENSDARG0000010012817
stab2 / stabilin 2 / Q8R4U0* / Q8WWQ8* / Stabilin-2 Short form stabilin-2*ENSDARG0000004574813
stab1 / stabilin 1 / Q9NY15*ENSDARG0000007648411


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR000859  CUB domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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