ENSG00000123610


Homo sapiens

Features
Gene ID: ENSG00000123610
  
Biological name :TNFAIP6
  
Synonyms : P98066 / TNFAIP6 / TNF alpha induced protein 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q23.3
Gene start: 151357592
Gene end: 151380048
  
Corresponding Affymetrix probe sets: 206025_s_at (Human Genome U133 Plus 2.0 Array)   206026_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000243347
NCBI entrez gene - 7130     See in Manteia.
OMIM - 600410
RefSeq - NM_007115
RefSeq Peptide - NP_009046
swissprot - P98066
Ensembl - ENSG00000123610
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfaip6ENSDARG00000093440Danio rerio
 TNFAIP6ENSGALG00000012481Gallus gallus
 O08859ENSMUSG00000053475Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VCAN / P13611 / versicanENSG0000003842727
ACAN / aggrecanENSG0000015776626
BCAN / Q96GW7 / brevicanENSG0000013269223
NCAN / O14594 / neurocanENSG0000013028723
HAPLN4 / Q86UW8 / hyaluronan and proteoglycan link protein 4ENSG0000018766420
HAPLN2 / Q9GZV7 / hyaluronan and proteoglycan link protein 2ENSG0000013270219
HAPLN1 / P10915 / hyaluronan and proteoglycan link protein 1ENSG0000014568117
HAPLN3 / Q96S86 / hyaluronan and proteoglycan link protein 3ENSG0000014051117
STAB2 / Q8WWQ8 / stabilin 2ENSG0000013601116
STAB1 / Q9NY15 / stabilin 1ENSG0000001032715


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR000859  CUB domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR035914  Spermadhesin, CUB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response TAS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0030728 ovulation IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0050728 negative regulation of inflammatory response IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:1904724 tertiary granule lumen TAS
 cellular_componentGO:1904813 ficolin-1-rich granule lumen TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005540 hyaluronic acid binding TAS


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr