ENSG00000157766


Homo sapiens

Features
Gene ID: ENSG00000157766
  
Biological name :ACAN
  
Synonyms : ACAN / aggrecan
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q26.1
Gene start: 88803442
Gene end: 88875354
  
Corresponding Affymetrix probe sets: 1554950_at (Human Genome U133 Plus 2.0 Array)   205679_x_at (Human Genome U133 Plus 2.0 Array)   207692_s_at (Human Genome U133 Plus 2.0 Array)   217161_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453342
Ensembl peptide - ENSP00000453003
Ensembl peptide - ENSP00000453499
Ensembl peptide - ENSP00000484456
Ensembl peptide - ENSP00000453581
Ensembl peptide - ENSP00000341615
Ensembl peptide - ENSP00000387356
Ensembl peptide - ENSP00000452682
NCBI entrez gene - 176     See in Manteia.
OMIM - 155760
RefSeq - XM_017021987
RefSeq - NM_001135
RefSeq - NM_013227
RefSeq - XM_006720419
RefSeq - XM_011521313
RefSeq - XM_011521314
RefSeq - XM_017021985
RefSeq - XM_017021986
RefSeq Peptide - NP_001126
RefSeq Peptide - NP_037359
swissprot - E7EX88
swissprot - E7ENV9
swissprot - H0YK70
swissprot - H0YM81
swissprot - H0YMF1
swissprot - Q6PID9
swissprot - A0A087X1T7
Ensembl - ENSG00000157766
  
Related genetic diseases (OMIM): 165800 - Short stature and advanced bone age, with or without early-onset osteoarthritis and/or osteochondritis dissecans, 165800
  608361 - ?Spondyloepiphyseal dysplasia, Kimberley type, 608361
  612813 - ?Spondyloepimetaphyseal dysplasia, aggrecan type, 612813
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 acanaENSDARG00000035891Danio rerio
 acanbENSDARG00000045799Danio rerio
 ACANENSGALG00000006725Gallus gallus
 AcanENSMUSG00000030607Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VCAN / P13611 / versicanENSG0000003842724
NCAN / O14594 / neurocanENSG0000013028718
BCAN / Q96GW7 / brevicanENSG0000013269215
STAB2 / Q8WWQ8 / stabilin 2ENSG0000013601111
STAB1 / Q9NY15 / stabilin 1ENSG0000001032711
HAPLN4 / Q86UW8 / hyaluronan and proteoglycan link protein 4ENSG000001876645
HAPLN1 / P10915 / hyaluronan and proteoglycan link protein 1ENSG000001456815
HAPLN3 / Q96S86 / hyaluronan and proteoglycan link protein 3ENSG000001405115
HAPLN2 / Q9GZV7 / hyaluronan and proteoglycan link protein 2ENSG000001327024
P98066 / TNFAIP6 / TNF alpha induced protein 6ENSG000001236103


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000436  Sushi/SCR/CCP domain
 IPR000538  Link domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR001881  EGF-like calcium-binding domain
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013032  EGF-like, conserved site
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018097  EGF-like calcium-binding, conserved site
 IPR018378  C-type lectin, conserved site
 IPR033987  Aggrecan/versican, C-type lectin-like domain
 IPR035976  Sushi/SCR/CCP superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000470 Short neck 
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 HP:0000924 Abnormality of the musculoskeletal system "An abnormality of the musculoskeletal system including one or more abnormalities affecting bones, muscles, cartilage, tendons, ligaments, joints, and other connective tissue." [HPO:curators]
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 HP:0000926 Platyspondyly 
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 HP:0001156 Brachydactyly 
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 HP:0001388 Joint laxity 
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 HP:0001507 Growth abnormality 
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 HP:0001552 Barrel-shaped chest 
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001609 Hoarse voice 
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 HP:0002515 Waddling gait 
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 HP:0002651 Spondyloepimetaphyseal dysplasia 
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 HP:0002655 Spondyloepiphyseal dysplasia 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002758 Osteoarthritis 
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 HP:0002795 Functional respiratory abnormality 
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 HP:0002857 Genu valgum 
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 HP:0002938 Lumbar hyperlordosis 
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 HP:0002970 Genu varum 
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 HP:0002983 Micromelia 
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 HP:0003027 Mesomelia "Shortening of the middle parts of the limbs (forearm and lower leg) in relation to the upper and terminal segments." [HPO:sdoelken]
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 HP:0003370 Flat capital femoral epiphyses 
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 HP:0003508 Proportionate short stature "Short stature affecting the trunk and the limbs proportionately." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004482 Relative macrocephaly "A relatively mild degree of macrocephaly in which the head circumference is not above two standard deviations from the mean, but appears dysproportionately large when other factors such as body stature are taken into account." [HPO:curators]
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 HP:0005285 Absent nasal bridge 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0007281 Developmental arrest 
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 HP:0008905 Rhizomelic short stature 
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 HP:0009381 Hypoplastic/small fingers 
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 HP:0009778 Hypoplastic/small thumb 
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 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
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 HP:0010886 Osteochondrosis dissecans "A joint disorder caused by blood deprivation in the subchondral bone causing the subchondral bone to die in a process called avascular necrosis. The bone is then reabsorbed by the body, leaving the articular cartilage it supported prone to damage. The result is fragmentation (dissection) of both cartilage and bone, and the free movement of these osteochondral fragments within the joint space, causing pain and further damage." [HPO:sdoelken]
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0100777 Exostoses 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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