ENSGALG00000006725


Gallus gallus

Features
Gene ID: ENSGALG00000006725
  
Biological name :ACAN
  
Synonyms : ACAN
  
Possible biological names infered from orthology : aggrecan / Aggrecan core protein / Q61282
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 13047888
Gene end: 13091063
  
Corresponding Affymetrix probe sets: Gga.3977.3.S1_a_at (Chicken Array)   GgaAffx.22040.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010867
NCBI entrez gene - 395798     See in Manteia.
RefSeq - XM_015291979
RefSeq - NM_204955
RefSeq - XM_015291977
RefSeq - XM_015291978
RefSeq Peptide - NP_990286
swissprot - F1NZX1
Ensembl - ENSGALG00000006725
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 acanaENSDARG00000035891Danio rerio
 acanbENSDARG00000045799Danio rerio
 ACANENSG00000157766Homo sapiens
 AcanENSMUSG00000030607Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VCAN / versican core protein precursor / P13611* / versican*ENSGALG0000001562421
NCAN / neurocan core protein precursor / O14594* / neurocan*ENSGALG0000003648417
BCAN / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSGALG0000004546916
STAB1 / stabilin 1 / Q9NY15*ENSGALG000000436729
HAPLN3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSGALG000000211356
HAPLN1 / P07354 / Hyaluronan and proteoglycan link protein 1 / P10915* / Q9QUP5*ENSGALG000000156276
HAPLN2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSGALG000000132345
HAPLN4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSGALG000000265635
ENSGALG000000392453
TNFAIP6 / TNF alpha induced protein 6 / O08859* / P98066* / tumor necrosis factor alpha induced protein 6*ENSGALG000000124813
ENSGALG000000413601
ENSGALG000000298241


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000436  Sushi/SCR/CCP domain
 IPR000538  Link domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR001881  EGF-like calcium-binding domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013032  EGF-like, conserved site
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018097  EGF-like calcium-binding, conserved site
 IPR018378  C-type lectin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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