ENSGALG00000045469


Gallus gallus

Features
Gene ID: ENSGALG00000045469
  
Biological name :BCAN
  
Synonyms : BCAN / brevican
  
Possible biological names infered from orthology : Brevican core protein / Q61361 / Q96GW7
  
Species: Gallus gallus
  
Chr. number: 25
Strand: 1
Band:
Gene start: 1478428
Gene end: 1486301
  
Corresponding Affymetrix probe sets: GgaAffx.8428.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061057
NCBI entrez gene - 425976     See in Manteia.
RefSeq - XM_015298414
RefSeq - XM_015298416
RefSeq - XM_015298417
RefSeq - XM_015298418
RefSeq - XM_015298413
swissprot - A0A1L1RQI4
Ensembl - ENSGALG00000045469
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bcanENSDARG00000099412Danio rerio
 BCANENSG00000132692Homo sapiens
 BcanENSMUSG00000004892Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACAN / Q61282* / aggrecan* / Aggrecan core protein *ENSGALG0000000672534
NCAN / neurocan core protein precursor / O14594* / neurocan*ENSGALG0000003648432
VCAN / versican core protein precursor / P13611* / versican*ENSGALG0000001562432
HAPLN3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSGALG0000002113513
HAPLN1 / P07354 / Hyaluronan and proteoglycan link protein 1 / P10915* / Q9QUP5*ENSGALG0000001562713
HAPLN4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSGALG0000002656313
HAPLN2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSGALG0000001323412
STAB1 / stabilin 1 / Q9NY15*ENSGALG0000004367212
TNFAIP6 / TNF alpha induced protein 6 / O08859* / P98066* / tumor necrosis factor alpha induced protein 6*ENSGALG000000124817
ENSGALG000000392455
ENSGALG000000298242
ENSGALG000000413601


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000538  Link domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013032  EGF-like, conserved site
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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