ENSDARG00000068516


Danio rerio

Features
Gene ID: ENSDARG00000068516
  
Biological name :hapln1b
  
Synonyms : hapln1b / hyaluronan and proteoglycan link protein 1b
  
Possible biological names infered from orthology : HAPLN1 / hyaluronan and proteoglycan link protein 1 / P10915 / Q9QUP5
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 43269918
Gene end: 43334999
  
Corresponding Affymetrix probe sets: Dr.8617.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000062630
Ensembl peptide - ENSDARP00000116765
Ensembl peptide - ENSDARP00000154994
NCBI entrez gene - 569074     See in Manteia.
swissprot - E7FBW8
swissprot - E9QFH9
ZFIN ID - ZDB-GENE-050920-1
Ensembl - ENSDARG00000068516
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HAPLN1ENSGALG00000015627Gallus gallus
 HAPLN1ENSG00000145681Homo sapiens
 Hapln1ENSMUSG00000021613Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hapln1a / hyaluronan and proteoglycan link protein 1aENSDARG0000008976957
hapln4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSDARG0000001854250
hapln3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSDARG0000004580247
hapln2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSDARG0000000390340
ncanb / neurocan b / NCAN* / O14594* / neurocan*ENSDARG0000000578338
bcan / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSDARG0000009941237
acana / aggrecan a / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000003589137
acanb / aggrecan b / ACAN* / Q61282* / aggrecan* / Aggrecan core protein *ENSDARG0000004579937
vcana / versican a / VCAN* / P13611* / versican*ENSDARG0000010351534
vcanb / versican b / VCAN* / P13611* / versican*ENSDARG0000000940134
CU861477.1 / NCAN* / O14594* / neurocan*ENSDARG0000010012828
stab1 / stabilin 1 / Q9NY15*ENSDARG0000007648415
stab2 / stabilin 2 / Q8R4U0* / Q8WWQ8* / Stabilin-2 Short form stabilin-2*ENSDARG0000004574814
tnfaip6 / tumor necrosis factor, alpha-induced protein 6 / O08859* / P98066* / TNF alpha induced protein 6*ENSDARG0000009344014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IBA
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007417 central nervous system development IBA
 molecular_functionGO:0005201 extracellular matrix structural constituent IBA
 molecular_functionGO:0005540 hyaluronic acid binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001286 caudal vein plexus caudal vein plexus dilated , abnormal
Show

 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel hypoplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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