ENSGALG00000025774


Gallus gallus

Features
Gene ID: ENSGALG00000025774
  
Biological name :HOXB2
  
Synonyms : homeobox B2 / HOXB2
  
Possible biological names infered from orthology : Homeobox protein Hox-B2 / P0C1T1 / P14652
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 3869146
Gene end: 3871830
  
Corresponding Affymetrix probe sets: Gga.11462.1.A1_at (Chicken Array)   GgaAffx.25263.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043067
NCBI entrez gene - 429940     See in Manteia.
RefSeq - XM_003642792
swissprot - R4GLI3
Ensembl - ENSGALG00000025774
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOXB2ENSG00000173917Homo sapiens
 Hoxb2ENSMUSG00000075588Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXA2 / Q08727 / Homeobox protein Hox-A2 / O43364* / P31245* / homeobox A2*ENSGALG0000004052151
HOXB3 / P09026* / P14651* / homeobox B3* / Homeobox protein Hox-B3 *ENSGALG0000004321932
HOXA3 / homeobox A3 / O43365* / P02831* / Homeobox protein Hox-A3 *ENSGALG0000002792531
HOXD3 / homeobox D3 / P09027* / P31249*ENSGALG0000002342030
HOXB1ENSGALG0000001345423
HOXA1 / homeobox A1 / P49639*ENSGALG0000002809523
PDX1 / pancreatic and duodenal homeobox 1 / P52945* / P52946* / Pancreas/duodenum homeobox protein 1 *ENSGALG0000003845421
GSX1 / GS homeobox 1 / P31315* / Q9H4S2*ENSGALG0000002977919
GSX2* / P31316* / Q9BZM3* / GS homeobox 2*ENSGALG0000003594319


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002011 morphogenesis of an epithelial sheet IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0021569 rhombomere 3 development IEA
 biological_processGO:0021570 rhombomere 4 development IEA
 biological_processGO:0021612 facial nerve structural organization IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:0048857 neural nucleus development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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