ENSGALG00000029779


Gallus gallus

Features
Gene ID: ENSGALG00000029779
  
Biological name :GSX1
  
Synonyms : GS homeobox 1 / GSX1
  
Possible biological names infered from orthology : P31315 / Q9H4S2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 176114994
Gene end: 176115939
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000053557
NCBI entrez gene - 107052208     See in Manteia.
RefSeq - XM_015279740
swissprot - A0A1D5PL43
Ensembl - ENSGALG00000029779
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gsx1ENSDARG00000035735Danio rerio
 GSX1ENSG00000169840Homo sapiens
 Gsx1ENSMUSG00000053129Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GSX2* / P31316* / Q9BZM3* / GS homeobox 2*ENSGALG0000003594345
HOXB3 / P09026* / P14651* / homeobox B3* / Homeobox protein Hox-B3 *ENSGALG0000004321926
HOXD3 / homeobox D3 / P09027* / P31249*ENSGALG0000002342024
PDX1 / pancreatic and duodenal homeobox 1 / P52945* / P52946* / Pancreas/duodenum homeobox protein 1 *ENSGALG0000003845424
HOXA2 / Q08727 / Homeobox protein Hox-A2 / O43364* / P31245* / homeobox A2*ENSGALG0000004052123
HOXA3 / homeobox A3 / O43365* / P02831* / Homeobox protein Hox-A3 *ENSGALG0000002792523
HOXA1 / homeobox A1 / P49639*ENSGALG0000002809523
HOXB1ENSGALG0000001345421
HOXB2 / homeobox B2 / P0C1T1* / P14652* / Homeobox protein Hox-B2 *ENSGALG0000002577418


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0021527 spinal cord association neuron differentiation IEA
 biological_processGO:0021854 hypothalamus development IEA
 biological_processGO:0021984 adenohypophysis development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048663 neuron fate commitment IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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