ENSGALG00000026131


Gallus gallus

Features
Gene ID: ENSGALG00000026131
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q8NFR3 / Q925E8 / serine palmitoyltransferase small subunit B / SPTSSB
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 22078966
Gene end: 22079208
  
Corresponding Affymetrix probe sets: Gga.11012.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042695
NCBI entrez gene - 100859315     See in Manteia.
RefSeq - XM_015291765
RefSeq - XM_015291766
swissprot - R4GKJ3
Ensembl - ENSGALG00000026131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q1RLT2ENSDARG00000091658Danio rerio
 Q8NFR3ENSG00000196542Homo sapiens
 Q925E8ENSMUSG00000043461Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPTSSB / Q8NFR3* / Q925E8* / serine palmitoyltransferase small subunit B*ENSGALG0000002749451
SPTSSA / serine palmitoyltransferase small subunit A / Gm6993* / Q8R207* / Q969W0*ENSGALG0000002575529


Protein motifs (from Interpro)
Interpro ID Name
 IPR024512  Small subunit of serine palmitoyltransferase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000013493 SPTLC1 / serine palmitoyltransferase long chain base subunit 1 / O15269* / O35704* / Serine palmitoyltransferase 1 *  / complex
 ENSGALG00000009037 SPTLC3 / serine palmitoyltransferase long chain base subunit 3 / Q8BG54* / Q9NUV7* / Mus musculus serine palmitoyltransferase, long chain base subunit 3 (Sptlc3), transcript variant 1, mRNA.*  / complex
 ENSGALG00000031928 SPTLC2 / serine palmitoyltransferase long chain base subunit 2 / O15270* / P97363*  / complex






 

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contact: otassy@igbmc.fr