ENSGALG00000025755


Gallus gallus

Features
Gene ID: ENSGALG00000025755
  
Biological name :SPTSSA
  
Synonyms : serine palmitoyltransferase small subunit A / SPTSSA
  
Possible biological names infered from orthology : Gm6993 / Q8R207 / Q969W0
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 35937965
Gene end: 35942248
  
Corresponding Affymetrix probe sets: Gga.12647.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042220
NCBI entrez gene - 423318     See in Manteia.
RefSeq - NM_001302174
RefSeq Peptide - NP_001289103
swissprot - R4GJA8
Ensembl - ENSGALG00000025755
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5BJC1ENSDARG00000071203Danio rerio
 Q969W0ENSG00000165389Homo sapiens
 Gm6993ENSMUSG00000112187Mus musculus
 Q8R207ENSMUSG00000044408Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPTSSB / Q8NFR3* / Q925E8* / serine palmitoyltransferase small subunit B*ENSGALG0000002749440
Q8NFR3* / Q925E8* / SPTSSB* / serine palmitoyltransferase small subunit B*ENSGALG0000002613134


Protein motifs (from Interpro)
Interpro ID Name
 IPR024512  Small subunit of serine palmitoyltransferase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046513 ceramide biosynthetic process IEA
 cellular_componentGO:0017059 serine C-palmitoyltransferase complex IEA
 molecular_functionGO:0004758 serine C-palmitoyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000013493 SPTLC1 / serine palmitoyltransferase long chain base subunit 1 / O15269* / O35704* / Serine palmitoyltransferase 1 *  / complex
 ENSGALG00000009037 SPTLC3 / serine palmitoyltransferase long chain base subunit 3 / Q8BG54* / Q9NUV7* / Mus musculus serine palmitoyltransferase, long chain base subunit 3 (Sptlc3), transcript variant 1, mRNA.*  / complex
 ENSGALG00000031928 SPTLC2 / serine palmitoyltransferase long chain base subunit 2 / O15270* / P97363*  / complex






 

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contact: otassy@igbmc.fr