ENSGALG00000026631


Gallus gallus

Features
Gene ID: ENSGALG00000026631
  
Biological name :HOXA10
  
Synonyms : homeobox A10 / HOXA10
  
Possible biological names infered from orthology : Homeobox protein Hox-A10 / P31260 / P31310
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 32709871
Gene end: 32712313
  
Corresponding Affymetrix probe sets: GgaAffx.23440.1.S1_at (Chicken Array)   GgaAffx.23440.1.S1_x_at (Chicken Array)   GgaAffx.23440.5.S1_at (Chicken Array)   GgaAffx.7013.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018009
NCBI entrez gene - 776143     See in Manteia.
RefSeq - NM_001305645
RefSeq Peptide - NP_001292574
swissprot - E1C8Y7
Ensembl - ENSGALG00000026631
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hoxb10aENSDARG00000011579Danio rerio
 HOXA10ENSG00000253293Homo sapiens
 Hoxa10ENSMUSG00000000938Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXD10 / homeobox D10 / P28358* / P28359* / Homeobox protein Hox-D10 *ENSGALG0000000927046
HOXC10 / homeobox C10 / P31257* / Q9NYD6* / Homeobox protein Hox-C10 *ENSGALG0000002939341
HOXD9 / homeobox D9 / P28356* / P28357* / Homeobox protein Hox-D9 *ENSGALG0000002751325
HOXB9 / homeobox B9 / P17482* / P20615* / Homeobox protein Hox-B9 *ENSGALG0000000127625
HOXA9 / P31269* / P09631* / AC004080.3* / homeobox A9* / Homeobox protein Hox-A9 *ENSGALG0000002898325
HOXC9 / homeobox C9 / P09633* / P31274* / Homeobox protein Hox-C9 *ENSGALG0000002943924
HOXD11 / P24342 / Homeobox protein Hox-D11 / P31277* / homeobox D11*ENSGALG0000003962921
HOXA11 / P31258 / Homeobox protein Hox-A11 / P31311* / P31270* / homeobox A11*ENSGALG0000004002120
HOXC11 / homeobox C11 / O43248* / P31313* / Homeobox protein Hox-C11 *ENSGALG0000004241619
HOXD12 / P24343 / Homeobox protein Hox-D12 / P23812* / P35452* / homeobox D12*ENSGALG0000000927417
HOXA13 / homeobox protein Hox-A13 / P31271* / homeobox A13*ENSGALG0000002723417
HOXC13 / homeobox C13 / P31276* / P50207* / Homeobox protein Hox-C13 *ENSGALG0000003608217
HOXD13 / homeobox protein Hox-D13 / P35453* / P70217* / homeobox D13*ENSGALG0000003203916
HOXB13 / homeobox B13 / P70321* / Q92826* / Homeobox protein Hox-B13 *ENSGALG0000003315415
HOXC12 / homeobox C12 / P31275* / Q8K5B8* / Homeobox protein Hox-C12 *ENSGALG0000003327213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009954 proximal/distal pattern formation IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060065 uterus development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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