ENSDARG00000011579


Danio rerio

Features
Gene ID: ENSDARG00000011579
  
Biological name :hoxb10a
  
Synonyms : homeobox B10a / hoxb10a
  
Possible biological names infered from orthology : homeobox A10 / Homeobox protein Hox-A10 / HOXA10 / P31260 / P31310
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 23669267
Gene end: 23671863
  
Corresponding Affymetrix probe sets: Dr.21613.1.A1_at (Zebrafish Array)   Dr.5724.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000099793
swissprot - A0A140TAU2
ZFIN ID - ZDB-GENE-000328-2
Ensembl - ENSDARG00000011579
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOXA10ENSGALG00000026631Gallus gallus
 HOXA10ENSG00000253293Homo sapiens
 Hoxa10ENSMUSG00000000938Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hoxc10a / homeobox C10a / Q9NYD6* / HOXC10* / P31257* / homeobox C10* / Homeobox protein Hox-C10 *ENSDARG0000007034838
Q90469 / hoxd10a / homeobox D10a / HOXD10* / P28358* / P28359* / homeobox D10* / Homeobox protein Hox-D10 *ENSDARG0000005785938
hoxa10b / homeobox A10bENSDARG0000003133737
hoxd9a / Q9PWM6 / homeobox D9aENSDARG0000005927436
hoxa9a / Q9PWL6 / homeobox A9a / HOXA9* / P09631* / P31269* / AC004080.3* / homeobox A9* / Homeobox protein Hox-A9 *ENSDARG0000010501334
hoxc9a / homeobox C9a / HOXC9* / P09633* / P31274* / homeobox C9* / Homeobox protein Hox-C9 *ENSDARG0000009280934
hoxa9b / homeobox A9b / HOXA9* / P31269* / P09631* / AC004080.3* / homeobox A9* / Homeobox protein Hox-A9 *ENSDARG0000005681933
Q9PWM2 / hoxb9a / homeobox B9a / HOXB9* / P17482* / P20615* / homeobox B9* / Homeobox protein Hox-B9 *ENSDARG0000005602330
hoxa11b / homeobox A11b / P31311* / HOXA11* / P31270* / homeobox A11* / Homeobox protein Hox-A11 *ENSDARG0000000700929
Q90470 / hoxd11a / homeobox D11a / HOXD11* / P31277* / homeobox D11*ENSDARG0000005926728
hoxa11a / homeobox A11a / P31311* / HOXA11* / P31270* / homeobox A11* / Homeobox protein Hox-A11 *ENSDARG0000010416227
Q58EL0 / hoxc11a / homeobox C11a / HOXC11* / O43248* / P31313* / homeobox C11* / Homeobox protein Hox-C11 *ENSDARG0000007035127
hoxc12b / homeobox C12b / HOXC12* / P31275* / homeobox C12*ENSDARG0000010313325
hoxc12a / homeobox C12a / Q8K5B8* / HOXC12* / P31275* / homeobox C12* / Homeobox protein Hox-C12 *ENSDARG0000007035225
hoxc11b / homeobox C11b / HOXC11* / O43248* / homeobox C11*ENSDARG0000010263125
Q90471 / hoxd12a / homeobox D12a / HOXD12* / P23812* / P35452* / homeobox D12* / Homeobox protein Hox-D12 *ENSDARG0000005926323
Q6W990 / hoxa13a / homeobox A13a / HOXA13* / P31271* / homeobox A13* / homeobox protein Hox-A13 *ENSDARG0000010031223
P79724 / hoxa13b / homeobox A13b / HOXA13* / P31271* / homeobox A13* / homeobox protein Hox-A13 *ENSDARG0000003625423
hoxc13a / homeobox C13a / P50207* / HOXC13* / P31276* / homeobox C13* / Homeobox protein Hox-C13 *ENSDARG0000007035322
Q1ECY2 / hoxb13a / homeobox B13aENSDARG0000005601522


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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