ENSGALG00000028983


Gallus gallus

Features
Gene ID: ENSGALG00000028983
  
Biological name :HOXA9
  
Synonyms : HOXA9
  
Possible biological names infered from orthology : AC004080.3 / homeobox A9 / Homeobox protein Hox-A9 / P09631 / P31269
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 32700853
Gene end: 32703521
  
Corresponding Affymetrix probe sets: Gga.16448.1.S1_at (Chicken Array)   Gga.649.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018013
NCBI entrez gene - 396096     See in Manteia.
RefSeq - NM_001305224
RefSeq Peptide - NP_001292153
swissprot - F1NJG5
Ensembl - ENSGALG00000028983
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR382300.2ENSDARG00000100358Danio rerio
 hoxa9aENSDARG00000105013Danio rerio
 hoxa9bENSDARG00000056819Danio rerio
 AC004080.3ENSG00000257184Homo sapiens
 HOXA9ENSG00000078399Homo sapiens
 Hoxa9ENSMUSG00000038227Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXB9 / homeobox B9 / P17482* / P20615* / Homeobox protein Hox-B9 *ENSGALG0000000127651
HOXC9 / homeobox C9 / P09633* / P31274* / Homeobox protein Hox-C9 *ENSGALG0000002943949
HOXD9 / homeobox D9 / P28356* / P28357* / Homeobox protein Hox-D9 *ENSGALG0000002751347
HOXA10 / homeobox A10 / P31260* / P31310* / Homeobox protein Hox-A10 *ENSGALG0000002663135
HOXD10 / homeobox D10 / P28358* / P28359* / Homeobox protein Hox-D10 *ENSGALG0000000927033
HOXC10 / homeobox C10 / P31257* / Q9NYD6* / Homeobox protein Hox-C10 *ENSGALG0000002939332
HOXA11 / P31258 / Homeobox protein Hox-A11 / P31311* / P31270* / homeobox A11*ENSGALG0000004002128
HOXD11 / P24342 / Homeobox protein Hox-D11 / P31277* / homeobox D11*ENSGALG0000003962927
HOXC11 / homeobox C11 / O43248* / P31313* / Homeobox protein Hox-C11 *ENSGALG0000004241625
HOXD12 / P24343 / Homeobox protein Hox-D12 / P23812* / P35452* / homeobox D12*ENSGALG0000000927423
HOXD13 / homeobox protein Hox-D13 / P35453* / P70217* / homeobox D13*ENSGALG0000003203922
HOXC13 / homeobox C13 / P31276* / P50207* / Homeobox protein Hox-C13 *ENSGALG0000003608222
HOXB13 / homeobox B13 / P70321* / Q92826* / Homeobox protein Hox-B13 *ENSGALG0000003315422
HOXA13 / homeobox protein Hox-A13 / P31271* / homeobox A13*ENSGALG0000002723422
HOXC12 / homeobox C12 / P31275* / Q8K5B8* / Homeobox protein Hox-C12 *ENSGALG0000003327218


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006711  Hox9, N-terminal activation domain
 IPR009057  Homeobox-like domain superfamily
 IPR017112  Homeobox protein HXA9/HXB9/HXC9
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009954 proximal/distal pattern formation IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030879 mammary gland development IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IEA
 biological_processGO:0045638 negative regulation of myeloid cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0060065 uterus development IEA
 biological_processGO:0060216 definitive hemopoiesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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