ENSGALG00000039629


Gallus gallus

Features
Gene ID: ENSGALG00000039629
  
Biological name :HOXD11
  
Synonyms : Homeobox protein Hox-D11 / HOXD11 / P24342
  
Possible biological names infered from orthology : homeobox D11 / P31277
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 16377071
Gene end: 16378655
  
Corresponding Affymetrix probe sets: Gga.958.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046110
NCBI entrez gene - 395328     See in Manteia.
RefSeq - NM_204620
RefSeq - XM_015289379
RefSeq Peptide - NP_989951
swissprot - P24342
Ensembl - ENSGALG00000039629
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q90470ENSDARG00000059267Danio rerio
 HOXD11ENSG00000128713Homo sapiens
 Hoxd11ENSMUSG00000042499Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXA11 / P31258 / Homeobox protein Hox-A11 / P31311* / P31270* / homeobox A11*ENSGALG0000004002154
HOXC11 / homeobox C11 / O43248* / P31313* / Homeobox protein Hox-C11 *ENSGALG0000004241651
HOXA10 / homeobox A10 / P31260* / P31310* / Homeobox protein Hox-A10 *ENSGALG0000002663127
HOXA9 / P31269* / P09631* / AC004080.3* / homeobox A9* / Homeobox protein Hox-A9 *ENSGALG0000002898325
HOXD10 / homeobox D10 / P28358* / P28359* / Homeobox protein Hox-D10 *ENSGALG0000000927024
HOXC10 / homeobox C10 / P31257* / Q9NYD6* / Homeobox protein Hox-C10 *ENSGALG0000002939324
HOXC9 / homeobox C9 / P09633* / P31274* / Homeobox protein Hox-C9 *ENSGALG0000002943923
HOXB9 / homeobox B9 / P17482* / P20615* / Homeobox protein Hox-B9 *ENSGALG0000000127622
HOXD9 / homeobox D9 / P28356* / P28357* / Homeobox protein Hox-D9 *ENSGALG0000002751322
HOXA13 / homeobox protein Hox-A13 / P31271* / homeobox A13*ENSGALG0000002723421
HOXD12 / P24343 / Homeobox protein Hox-D12 / P23812* / P35452* / homeobox D12*ENSGALG0000000927421
HOXC13 / homeobox C13 / P31276* / P50207* / Homeobox protein Hox-C13 *ENSGALG0000003608220
HOXD13 / homeobox protein Hox-D13 / P35453* / P70217* / homeobox D13*ENSGALG0000003203919
HOXB13 / homeobox B13 / P70321* / Q92826* / Homeobox protein Hox-B13 *ENSGALG0000003315416
HOXC12 / homeobox C12 / P31275* / Q8K5B8* / Homeobox protein Hox-C12 *ENSGALG0000003327215


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa
 IPR021918  Domain of unknown function DUF3528, homeobox protein, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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