ENSG00000128713


Homo sapiens

Features
Gene ID: ENSG00000128713
  
Biological name :HOXD11
  
Synonyms : homeobox D11 / HOXD11 / P31277
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q31.1
Gene start: 176104216
Gene end: 176109754
  
Corresponding Affymetrix probe sets: 214604_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000249504
NCBI entrez gene - 3237     See in Manteia.
OMIM - 142986
RefSeq - NM_021192
RefSeq Peptide - NP_067015
swissprot - P31277
Ensembl - ENSG00000128713
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q90470ENSDARG00000059267Danio rerio
 HOXD11ENSGALG00000039629Gallus gallus
 Hoxd11ENSMUSG00000042499Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXA11 / P31270 / homeobox A11ENSG0000000507349
HOXC11 / O43248 / homeobox C11ENSG0000012338841
HOXA10 / P31260 / homeobox A10ENSG0000025329325
HOXD12 / P35452 / homeobox D12ENSG0000017017822
HOXA9 / P31269 / homeobox A9ENSG0000007839922
HOXD9 / P28356 / homeobox D9ENSG0000012870922
HOXA13 / P31271 / homeobox A13ENSG0000010603120
HOXC9 / P31274 / homeobox C9ENSG0000018080620
HOXB9 / P17482 / homeobox B9ENSG0000017068920
HOXD10 / P28358 / homeobox D10ENSG0000012871020
HOXC10 / Q9NYD6 / homeobox C10ENSG0000018081819
HOXB13 / Q92826 / homeobox B13ENSG0000015918418
HOXC13 / P31276 / homeobox C13ENSG0000012336418
HOXC12 / P31275 / homeobox C12ENSG0000012340718
HOXD13 / P35453 / homeobox D13ENSG0000012871417
AC004080.3ENSG0000025718414


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa
 IPR021918  Domain of unknown function DUF3528, homeobox protein, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0009953 dorsal/ventral pattern formation ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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