ENSG00000005073


Homo sapiens

Features
Gene ID: ENSG00000005073
  
Biological name :HOXA11
  
Synonyms : homeobox A11 / HOXA11 / P31270
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p15.2
Gene start: 27181510
Gene end: 27185223
  
Corresponding Affymetrix probe sets: 208493_at (Human Genome U133 Plus 2.0 Array)   213823_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000006015
Ensembl peptide - ENSP00000448962
NCBI entrez gene - 3207     See in Manteia.
OMIM - 142958
RefSeq - NM_005523
RefSeq Peptide - NP_005514
swissprot - P31270
swissprot - H0YIA6
Ensembl - ENSG00000005073
  
Related genetic diseases (OMIM): 605432 - Radioulnar synostosis with amegakaryocytic thrombocytopenia 1, 605432

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hoxa11aENSDARG00000104162Danio rerio
 hoxa11bENSDARG00000007009Danio rerio
 HOXA11ENSGALG00000040021Gallus gallus
 Hoxa11ENSMUSG00000038210Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXD11 / P31277 / homeobox D11ENSG0000012871353
HOXC11 / O43248 / homeobox C11ENSG0000012338851
HOXA10 / P31260 / homeobox A10ENSG0000025329325
HOXA9 / P31269 / homeobox A9ENSG0000007839924
HOXD10 / P28358 / homeobox D10ENSG0000012871023
HOXD9 / P28356 / homeobox D9ENSG0000012870922
HOXC9 / P31274 / homeobox C9ENSG0000018080621
HOXC10 / Q9NYD6 / homeobox C10ENSG0000018081821
HOXD12 / P35452 / homeobox D12ENSG0000017017821
HOXA13 / P31271 / homeobox A13ENSG0000010603120
HOXB9 / P17482 / homeobox B9ENSG0000017068920
HOXD13 / P35453 / homeobox D13ENSG0000012871419
HOXC12 / P31275 / homeobox C12ENSG0000012340719
HOXC13 / P31276 / homeobox C13ENSG0000012336418
HOXB13 / Q92826 / homeobox B13ENSG0000015918417
AC004080.3ENSG0000025718414


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa
 IPR021918  Domain of unknown function DUF3528, homeobox protein, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0001656 metanephros development IEA
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IEA
 biological_processGO:0001759 organ induction IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development ISS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0007501 mesodermal cell fate specification IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0009653 anatomical structure morphogenesis TAS
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0009954 proximal/distal pattern formation IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0010720 positive regulation of cell development IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0032330 regulation of chondrocyte differentiation IEA
 biological_processGO:0032332 positive regulation of chondrocyte differentiation IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0048589 developmental growth IEA
 biological_processGO:0060065 uterus development IEA
 biological_processGO:0060272 embryonic skeletal joint morphogenesis IEA
 biological_processGO:0060348 bone development IEA
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0032993 protein-DNA complex IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000967 Petechiae 
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 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001385 Hip dysplasia 
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 HP:0001905 Congenital thrombocytopenia 
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 HP:0001915 Aplastic anemia 
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 HP:0002827 Dislocated hips 
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 HP:0002974 Radioulnar synostosis "An abnormal osseous union (fusion) between the radius and the ulna." [HPO:curators]
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 HP:0002986 Radial bowing 
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 HP:0003031 Ulnar bowing "Bending of the diaphysis (shaft) of the ulna, usually in the convex posterior direction." [HPO:curators]
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 HP:0003182 Shallow acetabular fossae 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004859 amegakaryocytic thrombocytopenia 
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 HP:0005037 Proximal radio-ulnar synostosis "An abnormal osseous union (fusion) between the proximal portions of the radius and the ulna." [HPO:curators]
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 HP:0005548 Megakaryocytopenia 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0006394 Limited pronation/supination of forearm "A limitation of the ability to place the forearm in a position such that the palm faces anteriorly (supination) and to place the forearm in a position such that the palm faces posteriorly (pronation)." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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