ENSG00000078399


Homo sapiens

Features
Gene ID: ENSG00000078399
  
Biological name :HOXA9
  
Synonyms : homeobox A9 / HOXA9 / P31269
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p15.2
Gene start: 27162435
Gene end: 27175180
  
Corresponding Affymetrix probe sets: 209905_at (Human Genome U133 Plus 2.0 Array)   214651_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000343619
Ensembl peptide - ENSP00000379634
NCBI entrez gene - 3205     See in Manteia.
OMIM - 142956
RefSeq - NM_152739
RefSeq Peptide - NP_689952
swissprot - A8MVF3
swissprot - P31269
Ensembl - ENSG00000078399
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR382300.2ENSDARG00000100358Danio rerio
 hoxa9aENSDARG00000105013Danio rerio
 hoxa9bENSDARG00000056819Danio rerio
 HOXA9ENSGALG00000028983Gallus gallus
 Hoxa9ENSMUSG00000038227Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXB9 / P17482 / homeobox B9ENSG0000017068947
HOXC9 / P31274 / homeobox C9ENSG0000018080646
HOXD9 / P28356 / homeobox D9ENSG0000012870944
AC004080.3ENSG0000025718440
HOXA10 / P31260 / homeobox A10ENSG0000025329336
HOXC10 / Q9NYD6 / homeobox C10ENSG0000018081833
HOXD10 / P28358 / homeobox D10ENSG0000012871031
HOXA11 / P31270 / homeobox A11ENSG0000000507328
HOXD11 / P31277 / homeobox D11ENSG0000012871327
HOXC11 / O43248 / homeobox C11ENSG0000012338825
HOXC12 / P31275 / homeobox C12ENSG0000012340724
HOXD12 / P35452 / homeobox D12ENSG0000017017822
HOXA13 / P31271 / homeobox A13ENSG0000010603122
HOXD13 / P35453 / homeobox D13ENSG0000012871421
HOXC13 / P31276 / homeobox C13ENSG0000012336421
HOXB13 / Q92826 / homeobox B13ENSG0000015918420


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006711  Hox9, N-terminal activation domain
 IPR009057  Homeobox-like domain superfamily
 IPR017112  Homeobox protein HXA9/HXB9/HXC9
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development TAS
 biological_processGO:0042118 endothelial cell activation IMP
 biological_processGO:0045638 negative regulation of myeloid cell differentiation ISS
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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