ENSGALG00000029521


Gallus gallus

Features
Gene ID: ENSGALG00000029521
  
Biological name :SKOR1
  
Synonyms : SKI family transcriptional corepressor 1 / SKOR1
  
Possible biological names infered from orthology : P84550 / Q8BX46
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 19087903
Gene end: 19091871
  
Corresponding Affymetrix probe sets: GgaAffx.4979.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051840
NCBI entrez gene - 107054237     See in Manteia.
RefSeq - XM_015292231
swissprot - A0A1D5PGB9
Ensembl - ENSGALG00000029521
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q1LXZ9ENSDARG00000062448Danio rerio
 skor1aENSDARG00000069030Danio rerio
 SKOR1ENSG00000188779Homo sapiens
 Skor1ENSMUSG00000022245Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SKOR2* / A7M7C7* / Q2VWA4* / SKI family transcriptional corepressor 2*ENSGALG0000004554427
SKI / ski oncogene / P12755* / SKI proto-oncogene*ENSGALG0000000122919
SKIL / ski-like protein / Q60665* / P12757* / SKI-like* / SKI like proto-oncogene*ENSGALG0000000935617


Protein motifs (from Interpro)
Interpro ID Name
 IPR003380  SKI/SNO/DAC domain
 IPR009061  Putative DNA-binding domain superfamily
 IPR010919  SAND-like domain superfamily
 IPR014890  c-SKI SMAD4-binding domain
 IPR023216  Transcription regulator SKI/SnoN
 IPR028762  Ski family transcriptional corepressor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030514 negative regulation of BMP signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0046332 SMAD binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr