ENSGALG00000030569


Gallus gallus

Features
Gene ID: ENSGALG00000030569
  
Biological name :TRIM41
  
Synonyms : TRIM41
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase TRIM41 / Q5NCC3 / Q8WV44 / Q96A61 / TRIM52 / tripartite motif containing 41 / tripartite motif containing 52
  
Species: Gallus gallus
  
Chr. number: 16
Strand: -1
Band:
Gene start: 158676
Gene end: 163346
  
Corresponding Affymetrix probe sets: GgaAffx.26500.2.S1_x_at (Chicken Array)   GgaAffx.26500.3.S1_at (Chicken Array)   GgaAffx.8327.2.S1_at (Chicken Array)   GgaAffx.8327.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000083
NCBI entrez gene - 417043     See in Manteia.
RefSeq - NM_001030672
RefSeq - XM_015294958
RefSeq Peptide - NP_001025843
swissprot - Q5EVY2
Ensembl - ENSGALG00000030569
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WV44ENSG00000146063Homo sapiens
 Q96A61ENSG00000183718Homo sapiens
 Q5NCC3ENSMUSG00000040365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM7 / tripartite motif containing 7 / Q923T7* / Q9C029*ENSGALG0000000010736
TRIM7.2 / zinc finger protein RFP ENSGALG0000003827832
TRIM39.2 / tripartite motif containing 39 ENSGALG0000003717032
TRIM27.1ENSGALG0000003039730
TRIM27.2ENSGALG0000001983530
ENSGALG0000004161826
TRIM62 / tripartite motif containing 62 / Q80V85* / Q9BVG3* / E3 ubiquitin-protein ligase TRIM62 *ENSGALG0000002843722
Q810I2* / Q86UV6* / Q86UV7* / Q86XT4* / TRIM50* / TRIM73* / TRIM74* / tripartite motif containing 74* / tripartite motif containing 50* / tripartite motif containing 73* / Mus musculus trip...ENSGALG0000002169621
ENSGALG0000002130121
TRIM35 / tripartite motif containing 35 / Q9UPQ4*ENSGALG0000001659514


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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