ENSMUSG00000040365


Mus musculus

Features
Gene ID: ENSMUSG00000040365
  
Biological name :Trim41
  
Synonyms : E3 ubiquitin-protein ligase TRIM41 / Q5NCC3 / Trim41
  
Possible biological names infered from orthology : Q8WV44 / tripartite motif containing 41
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B1.2
Gene start: 48806404
Gene end: 48817353
  
Corresponding Affymetrix probe sets: 10385486 (MoGene1.0st)   1424275_s_at (Mouse Genome 430 2.0 Array)   1440268_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037055
Ensembl peptide - ENSMUSP00000118789
Ensembl peptide - ENSMUSP00000119707
Ensembl peptide - ENSMUSP00000121705
NCBI entrez gene - 211007     See in Manteia.
MGI - MGI:2384814
RefSeq - XM_006532759
RefSeq - NM_145377
RefSeq - XM_006532758
RefSeq Peptide - NP_663352
swissprot - Q5NCC2
swissprot - Q5NCC3
swissprot - Q5NCC4
swissprot - F6X2H0
Ensembl - ENSMUSG00000040365
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM41ENSGALG00000030569Gallus gallus
 Q8WV44ENSG00000146063Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trim7 / Q923T7 / tripartite motif-containing 7 / Q9C029*ENSMUSG0000004035030
Q62158 / Trim27 / Zinc finger protein RFP / P14373* / tripartite motif containing 27*ENSMUSG0000002132627
Q9WUH5 / Trim10 / Tripartite motif-containing protein 10 / Q9UDY6* / tripartite motif containing 10*ENSMUSG0000007340025
Q99PN3 / Trim26 / Tripartite motif-containing protein 26 / Q12899* / tripartite motif containing 26*ENSMUSG0000002445723
Q80X56 / Trim69 / E3 ubiquitin-protein ligase TRIM69 / Q86WT6* / tripartite motif containing 69*ENSMUSG0000003336822
Q8R0K2 / Trim31 / E3 ubiquitin-protein ligase TRIM31 / Q9BZY9* / tripartite motif containing 31*ENSMUSG0000005806321
Trim35 / tripartite motif-containing 35 / Q9UPQ4*ENSMUSG0000002204320
Q810I2 / Trim50 / Mus musculus tripartite motif-containing 50 (Trim50), transcript variant 2, mRNA. / Q86UV7* / Q86XT4* / TRIM73* / TRIM74* / Q86UV6* / tripartite motif containing 50* / tri...ENSMUSG0000005338820
Q80V85 / Trim62 / E3 ubiquitin-protein ligase TRIM62 / Q9BVG3* / tripartite motif containing 62*ENSMUSG0000004100020
Q1XH17 / Trim72 / Tripartite motif-containing protein 72 / Q6ZMU5* / tripartite motif containing 72*ENSMUSG0000004282818
Mefv / Pyrin / Q9JJ26 / O15553* / MEFV, pyrin innate immunity regulator*ENSMUSG0000002253413
Trim15 / tripartite motif-containing 15 / Q9C019*ENSMUSG0000005074712


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR020457  Zinc finger, B-box, chordata
 IPR022081  Domain of unknown function DUF3631


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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