ENSMUSG00000040350


Mus musculus

Features
Gene ID: ENSMUSG00000040350
  
Biological name :Trim7
  
Synonyms : Q923T7 / Trim7 / tripartite motif-containing 7
  
Possible biological names infered from orthology : Q9C029
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.2
Gene start: 48826140
Gene end: 48852209
  
Corresponding Affymetrix probe sets: 10375503 (MoGene1.0st)   1421398_at (Mouse Genome 430 2.0 Array)   1425743_at (Mouse Genome 430 2.0 Array)   1439352_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000039011
Ensembl peptide - ENSMUSP00000114958
Ensembl peptide - ENSMUSP00000116067
Ensembl peptide - ENSMUSP00000118669
Ensembl peptide - ENSMUSP00000104836
NCBI entrez gene - 94089     See in Manteia.
MGI - MGI:2137353
RefSeq - XM_017314860
RefSeq - XM_006534570
RefSeq - XM_006534571
RefSeq - XM_006534573
RefSeq - XM_006534574
RefSeq - XM_006534575
RefSeq - XM_006534576
RefSeq - XM_006534577
RefSeq - NM_053166
RefSeq - XM_006534568
RefSeq - XM_006534569
RefSeq Peptide - NP_444396
RefSeq Peptide - NP_001334375
swissprot - Q923T7
swissprot - B7ZC92
swissprot - Q5NCB7
swissprot - Q5NCB9
swissprot - B2RR25
Ensembl - ENSMUSG00000040350
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM7ENSGALG00000000107Gallus gallus
 TRIM7ENSG00000146054Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q62158 / Trim27 / Zinc finger protein RFP / P14373* / tripartite motif containing 27*ENSMUSG0000002132638
Q5NCC3 / Trim41 / E3 ubiquitin-protein ligase TRIM41 / Q8WV44* / tripartite motif containing 41*ENSMUSG0000004036537
Q9WUH5 / Trim10 / Tripartite motif-containing protein 10 / Q9UDY6* / tripartite motif containing 10*ENSMUSG0000007340032
Q80X56 / Trim69 / E3 ubiquitin-protein ligase TRIM69 / Q86WT6* / tripartite motif containing 69*ENSMUSG0000003336830
Q99PN3 / Trim26 / Tripartite motif-containing protein 26 / Q12899* / tripartite motif containing 26*ENSMUSG0000002445729
Q810I2 / Trim50 / Mus musculus tripartite motif-containing 50 (Trim50), transcript variant 2, mRNA. / Q86UV7* / Q86XT4* / TRIM73* / TRIM74* / Q86UV6* / tripartite motif containing 50* / tri...ENSMUSG0000005338828
Q80V85 / Trim62 / E3 ubiquitin-protein ligase TRIM62 / Q9BVG3* / tripartite motif containing 62*ENSMUSG0000004100027
Trim35 / tripartite motif-containing 35 / Q9UPQ4*ENSMUSG0000002204327
Q8R0K2 / Trim31 / E3 ubiquitin-protein ligase TRIM31 / Q9BZY9* / tripartite motif containing 31*ENSMUSG0000005806326
Q1XH17 / Trim72 / Tripartite motif-containing protein 72 / Q6ZMU5* / tripartite motif containing 72*ENSMUSG0000004282825
Trim15 / tripartite motif-containing 15 / Q9C019*ENSMUSG0000005074716
Mefv / Pyrin / Q9JJ26 / O15553* / MEFV, pyrin innate immunity regulator*ENSMUSG0000002253415


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR020457  Zinc finger, B-box, chordata


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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