ENSG00000146054


Homo sapiens

Features
Gene ID: ENSG00000146054
  
Biological name :TRIM7
  
Synonyms : Q9C029 / TRIM7 / tripartite motif containing 7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q35.3
Gene start: 181193924
Gene end: 181205293
  
Corresponding Affymetrix probe sets: 1554735_a_at (Human Genome U133 Plus 2.0 Array)   223694_at (Human Genome U133 Plus 2.0 Array)   239694_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000376991
Ensembl peptide - ENSP00000274773
Ensembl peptide - ENSP00000334666
Ensembl peptide - ENSP00000376994
Ensembl peptide - ENSP00000391458
NCBI entrez gene - 81786     See in Manteia.
OMIM - 609315
RefSeq - XM_017009904
RefSeq - NM_033342
RefSeq - NM_203293
RefSeq - NM_203294
RefSeq - NM_203295
RefSeq - NM_203296
RefSeq - NM_203297
RefSeq - XM_017009903
RefSeq Peptide - NP_976042
RefSeq Peptide - NP_976040
RefSeq Peptide - NP_976041
RefSeq Peptide - NP_976039
RefSeq Peptide - NP_976038
RefSeq Peptide - NP_203128
swissprot - Q9C029
Ensembl - ENSG00000146054
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM7ENSGALG00000000107Gallus gallus
 Trim7ENSMUSG00000040350Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8WV44 / TRIM41 / tripartite motif containing 41ENSG0000014606338
P14373 / TRIM27 / tripartite motif containing 27ENSG0000020471338
Q9UDY6 / TRIM10 / tripartite motif containing 10ENSG0000020461332
Q12899 / TRIM26 / tripartite motif containing 26ENSG0000023412731
Q9C019 / TRIM15 / tripartite motif containing 15ENSG0000020461029
Q86WT6 / TRIM69 / tripartite motif containing 69ENSG0000018588028
Q86XT4 / TRIM50 / tripartite motif containing 50ENSG0000014675528
Q9BVG3 / TRIM62 / tripartite motif containing 62ENSG0000011652527
Q9UPQ4 / TRIM35 / tripartite motif containing 35ENSG0000010422826
MEFV / O15553 / MEFV, pyrin innate immunity regulatorENSG0000010331326
Q6ZMU5 / TRIM72 / tripartite motif containing 72ENSG0000017723825
Q9BZY9 / TRIM31 / tripartite motif containing 31ENSG0000020461616
Q96A61 / TRIM52 / tripartite motif containing 52ENSG0000018371813
Q86UV6 / TRIM74 / tripartite motif containing 74ENSG0000015542813
Q86UV7 / TRIM73 / tripartite motif containing 73ENSG0000017880913


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR020457  Zinc finger, B-box, chordata


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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