ENSG00000183718


Homo sapiens

Features
Gene ID: ENSG00000183718
  
Biological name :TRIM52
  
Synonyms : Q96A61 / TRIM52 / tripartite motif containing 52
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q35.3
Gene start: 181254417
Gene end: 181261139
  
Corresponding Affymetrix probe sets: 1568594_s_at (Human Genome U133 Plus 2.0 Array)   221897_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000483005
NCBI entrez gene - 84851     See in Manteia.
RefSeq - XM_017009994
RefSeq - NM_032765
RefSeq - XM_005266000
RefSeq - XM_017009992
RefSeq - XM_017009993
RefSeq Peptide - NP_116154
swissprot - Q96A61
swissprot - L0CQ38
Ensembl - ENSG00000183718
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM41ENSGALG00000030569Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8WV44 / TRIM41 / tripartite motif containing 41ENSG0000014606362
TRIM7 / Q9C029 / tripartite motif containing 7ENSG0000014605422
P14373 / TRIM27 / tripartite motif containing 27ENSG0000020471321
Q9BZY9 / TRIM31 / tripartite motif containing 31ENSG0000020461620
Q12899 / TRIM26 / tripartite motif containing 26ENSG0000023412720
Q9UDY6 / TRIM10 / tripartite motif containing 10ENSG0000020461319
Q9BVG3 / TRIM62 / tripartite motif containing 62ENSG0000011652518
Q86XT4 / TRIM50 / tripartite motif containing 50ENSG0000014675517
Q9UPQ4 / TRIM35 / tripartite motif containing 35ENSG0000010422817
Q86UV6 / TRIM74 / tripartite motif containing 74ENSG0000015542815
Q6ZMU5 / TRIM72 / tripartite motif containing 72ENSG0000017723815
Q86UV7 / TRIM73 / tripartite motif containing 73ENSG0000017880915
MEFV / O15553 / MEFV, pyrin innate immunity regulatorENSG0000010331314
Q9C019 / TRIM15 / tripartite motif containing 15ENSG0000020461014
Q86WT6 / TRIM69 / tripartite motif containing 69ENSG0000018588014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IDA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr