ENSGALG00000030857


Gallus gallus

Features
Gene ID: ENSGALG00000030857
  
Biological name :USP48
  
Synonyms : ubiquitin carboxyl-terminal hydrolase 48 / USP48
  
Possible biological names infered from orthology : Q3V0C5 / Q86UV5 / ubiquitin specific peptidase 48
  
Species: Gallus gallus
  
Chr. number: 21
Strand: 1
Band:
Gene start: 6578743
Gene end: 6607436
  
Corresponding Affymetrix probe sets: GgaAffx.11642.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046640
NCBI entrez gene - 769457     See in Manteia.
RefSeq - NM_001079743
RefSeq - XM_015297256
RefSeq - XM_015297257
RefSeq Peptide - NP_001073211
swissprot - A0A1D5P1U8
Ensembl - ENSGALG00000030857
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp48ENSDARG00000090301Danio rerio
 USP48ENSG00000090686Homo sapiens
 Usp48ENSMUSG00000043411Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP34 / ubiquitin carboxyl-terminal hydrolase 34 / Q6ZQ93* / Q70CQ2* / ubiquitin specific peptidase 34*ENSGALG0000000445518
USP47 / ubiquitin specific peptidase 47 / Q8BY87* / Q96K76*ENSGALG0000000556918
USP40 / ubiquitin specific peptidase 40 / Q8BWR4* / Q9NVE5*ENSGALG0000000422817
ENSGALG0000001623616
USP24 / ubiquitin specific peptidase 24 / B1AY13* / Q9UPU5*ENSGALG0000001080515
USP7 / ubiquitin specific peptidase 7 / Q93009*ENSGALG0000000730714
USP41* / USP18* / Q9WTV6* / Q3LFD5* / Q9UMW8* / ubiquitin specific peptidase 18* / ubiquitin specific peptidase 41*ENSGALG000000130578


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR006615  Peptidase C19, ubiquitin-specific peptidase, DUSP domain
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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