ENSGALG00000031144


Gallus gallus

Features
Gene ID: ENSGALG00000031144
  
Biological name :ZIC3
  
Synonyms : ZIC3 / Zic family member 3
  
Possible biological names infered from orthology : O60481 / Q62521 / zinc finger protein of the cerebellum 3
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 4574010
Gene end: 4576392
  
Corresponding Affymetrix probe sets: Gga.206.1.A1_at (Chicken Array)   Gga.206.1.S1_at (Chicken Array)   GgaAffx.4042.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055541
NCBI entrez gene - 422251     See in Manteia.
RefSeq - XM_015278479
RefSeq - XM_015278480
RefSeq - XM_015278481
RefSeq - XM_015278482
RefSeq - XM_015278483
RefSeq - XM_420237
RefSeq - XM_015278478
swissprot - A0A1D5PRL4
Ensembl - ENSGALG00000031144
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zic3ENSDARG00000071497Danio rerio
 ZIC3ENSG00000156925Homo sapiens
 Zic3ENSMUSG00000067860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZIC2 / Zic family member 2 / O95409* / zinc finger protein of the cerebellum 2*ENSGALG0000004108368
ZIC1 / zinc finger protein ZIC 1 ENSGALG0000004053265
ZIC4 / Zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSGALG0000000681047
ZIC5 / Zic family member 5 / Q96T25* / zinc finger protein of the cerebellum 5*ENSGALG0000003419731
GLI3 / GLI family zinc finger 3 / P10071* / Q61602* / Transcriptional activator GLI3 Transcriptional repressor GLI3R*ENSGALG0000004026629
GLI2 / GLI family zinc finger 2 / P10070* / Q0VGT2* / Zinc finger protein GLI2 *ENSGALG0000001163027
GLIS3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSGALG0000001018023
GLIS1 / GLIS family zinc finger 1 / Q8K1M4* / Q8NBF1* / Zinc finger protein GLIS1 *ENSGALG0000001072122
GLIS2 / GLIS family zinc finger 2 / Q8VDL9* / Q9BZE0* / Zinc finger protein GLIS2 *ENSGALG0000003473720


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0035469 determination of pancreatic left/right asymmetry IEA
 biological_processGO:0035545 determination of left/right asymmetry in nervous system IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071907 determination of digestive tract left/right asymmetry IEA
 biological_processGO:0071910 determination of liver left/right asymmetry IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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