ENSGALG00000034737


Gallus gallus

Features
Gene ID: ENSGALG00000034737
  
Biological name :GLIS2
  
Synonyms : GLIS2 / GLIS family zinc finger 2
  
Possible biological names infered from orthology : Q8VDL9 / Q9BZE0 / Zinc finger protein GLIS2
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 12745474
Gene end: 12748951
  
Corresponding Affymetrix probe sets: Gga.177.1.A1_at (Chicken Array)   Gga.177.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051941
NCBI entrez gene - 374023     See in Manteia.
RefSeq - XM_015294680
swissprot - A0A1D5PGL8
Ensembl - ENSGALG00000034737
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 glis2aENSDARG00000078388Danio rerio
 glis2bENSDARG00000100232Danio rerio
 GLIS2ENSG00000126603Homo sapiens
 Glis2ENSMUSG00000014303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GLI2 / GLI family zinc finger 2 / P10070* / Q0VGT2* / Zinc finger protein GLI2 *ENSGALG0000001163032
GLI3 / GLI family zinc finger 3 / P10071* / Q61602* / Transcriptional activator GLI3 Transcriptional repressor GLI3R*ENSGALG0000004026632
GLIS3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSGALG0000001018027
GLIS1 / GLIS family zinc finger 1 / Q8K1M4* / Q8NBF1* / Zinc finger protein GLIS1 *ENSGALG0000001072126
ZIC2 / Zic family member 2 / O95409* / zinc finger protein of the cerebellum 2*ENSGALG0000004108324
ZIC1 / zinc finger protein ZIC 1 ENSGALG0000004053224
ZIC3 / Zic family member 3 / O60481* / Q62521* / zinc finger protein of the cerebellum 3*ENSGALG0000003114423
ZIC4 / Zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSGALG0000000681023
ZIC5 / Zic family member 5 / Q96T25* / zinc finger protein of the cerebellum 5*ENSGALG0000003419721


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0045879 negative regulation of smoothened signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060994 regulation of transcription from RNA polymerase II promoter involved in kidney development IEA
 biological_processGO:0061005 cell differentiation involved in kidney development IEA
 biological_processGO:1900182 positive regulation of protein localization to nucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0097730 non-motile cilium IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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