ENSDARG00000100232


Danio rerio

Features
Gene ID: ENSDARG00000100232
  
Biological name :glis2b
  
Synonyms : glis2b / GLIS family zinc finger 2b
  
Possible biological names infered from orthology : GLIS2 / GLIS family zinc finger 2 / Q8VDL9 / Q9BZE0 / Zinc finger protein GLIS2
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 12322170
Gene end: 12335927
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132038
Ensembl peptide - ENSDARP00000136705
NCBI entrez gene - 102725539     See in Manteia.
RefSeq - NM_001289885
RefSeq Peptide - NP_001276814
swissprot - A0A0R4IM25
swissprot - A0A0R4IE83
ZFIN ID - ZDB-GENE-091204-120
Ensembl - ENSDARG00000100232
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLIS2ENSGALG00000034737Gallus gallus
 GLIS2ENSG00000126603Homo sapiens
 Glis2ENSMUSG00000014303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
glis2a / GLIS family zinc finger 2a / GLIS2* / Q9BZE0* / GLIS family zinc finger 2*ENSDARG0000007838852
gli2a / GLI family zinc finger 2aENSDARG0000002564131
gli1 / GLI family zinc finger 1 / P08151*ENSDARG0000010124430
gli2b / GLI family zinc finger 2b / GLI2* / P10070* / GLI family zinc finger 2*ENSDARG0000002088428
gli3 / GLI family zinc finger 3ENSDARG0000005213128
glis3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSDARG0000006972624
glis1b / GLIS family zinc finger 1b / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000002793321
zic6 / zic family member 6ENSDARG0000007149620
zic5 / zic family member 5 (odd-paired homolog, Drosophila) / Q96T25* / Zic family member 5* / zinc finger protein of the cerebellum 5*ENSDARG0000001602220
glis1a / GLIS family zinc finger 1a / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000006858020
zic4 / zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSDARG0000003130720
zic2a / zic family member 2 (odd-paired homolog, Drosophila), a / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000001555419
zic3 / zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) / Q62521* / O60481* / Zic family member 3* / zinc finger protein of the cerebellum 3*ENSDARG0000007149719
zic1 / zic family member 1 (odd-paired homolog, Drosophila)ENSDARG0000001556719
zic2b / zic family member 2 (odd-paired homolog, Drosophila) b / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000003717818
si:dkey-149i17.7ENSDARG0000009468413


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003341 cilium movement IMP
 biological_processGO:0039023 pronephric duct morphogenesis IMP
 biological_processGO:0060028 convergent extension involved in axis elongation IMP
 biological_processGO:0060972 left/right pattern formation IMP
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium decreased length , abnormal
Show

 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000092 axis axis shortened , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000130 olfactory pit olfactory pit cilium decreased mobility , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0000155 somite somite broad , abnormal
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 ZFA:0001115 trunk trunk curved , abnormal
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 ZFA:0001558 pronephric tubule pronephric tubule cilium decreased length , abnormal
pronephric tubule cilium decreased mobility , abnormal
Show

 ZFA:0005781 cloaca cloaca decreased functionality , abnormal
cloaca cilium decreased mobility , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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