ENSDARG00000027933


Danio rerio

Features
Gene ID: ENSDARG00000027933
  
Biological name :glis1b
  
Synonyms : glis1b / GLIS family zinc finger 1b
  
Possible biological names infered from orthology : GLIS1 / GLIS family zinc finger 1 / Q8K1M4 / Q8NBF1 / Zinc finger protein GLIS1
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 18044257
Gene end: 18165677
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000035545
Ensembl peptide - ENSDARP00000120693
swissprot - F1QLU9
swissprot - F1QRD5
ZFIN ID - ZDB-GENE-081105-172
Ensembl - ENSDARG00000027933
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLIS1ENSGALG00000010721Gallus gallus
 GLIS1ENSG00000174332Homo sapiens
 Glis1ENSMUSG00000034762Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
glis3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSDARG0000006972628
glis1a / GLIS family zinc finger 1a / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000006858025
gli2a / GLI family zinc finger 2aENSDARG0000002564121
gli3 / GLI family zinc finger 3ENSDARG0000005213120
gli2b / GLI family zinc finger 2b / GLI2* / P10070* / GLI family zinc finger 2*ENSDARG0000002088419
gli1 / GLI family zinc finger 1 / P08151*ENSDARG0000010124419
zic4 / zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSDARG0000003130714
glis2a / GLIS family zinc finger 2a / GLIS2* / Q9BZE0* / GLIS family zinc finger 2*ENSDARG0000007838814
glis2b / GLIS family zinc finger 2b / GLIS2* / Q8VDL9* / Q9BZE0* / GLIS family zinc finger 2* / Zinc finger protein GLIS2 *ENSDARG0000010023213
zic2b / zic family member 2 (odd-paired homolog, Drosophila) b / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000003717813
zic3 / zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) / Q62521* / O60481* / Zic family member 3* / zinc finger protein of the cerebellum 3*ENSDARG0000007149713
zic2a / zic family member 2 (odd-paired homolog, Drosophila), a / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000001555413
zic5 / zic family member 5 (odd-paired homolog, Drosophila) / Q96T25* / Zic family member 5* / zinc finger protein of the cerebellum 5*ENSDARG0000001602213
zic6 / zic family member 6ENSDARG0000007149613
zic1 / zic family member 1 (odd-paired homolog, Drosophila)ENSDARG0000001556713
si:dkey-149i17.7ENSDARG000000946849


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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