ENSDARG00000069726


Danio rerio

Features
Gene ID: ENSDARG00000069726
  
Biological name :glis3
  
Synonyms : glis3 / GLIS family zinc finger 3
  
Possible biological names infered from orthology : Q6XP49 / Q8NEA6 / Zinc finger protein GLIS3
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 644574
Gene end: 690170
  
Corresponding Affymetrix probe sets: Dr.23764.1.A1_at (Zebrafish Array)   NM_001080607_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000118619
Ensembl peptide - ENSDARP00000138805
NCBI entrez gene - 571000     See in Manteia.
RefSeq - NM_001080607
RefSeq Peptide - NP_001074076
swissprot - F1QB13
swissprot - A0A0R4IU95
ZFIN ID - ZDB-GENE-070112-2232
Ensembl - ENSDARG00000069726
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLIS3ENSGALG00000010180Gallus gallus
 GLIS3ENSG00000107249Homo sapiens
 Glis3ENSMUSG00000052942Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
glis1b / GLIS family zinc finger 1b / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000002793326
gli3 / GLI family zinc finger 3ENSDARG0000005213124
gli2a / GLI family zinc finger 2aENSDARG0000002564124
gli2b / GLI family zinc finger 2b / GLI2* / P10070* / GLI family zinc finger 2*ENSDARG0000002088422
glis1a / GLIS family zinc finger 1a / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000006858021
gli1 / GLI family zinc finger 1 / P08151*ENSDARG0000010124421
zic4 / zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSDARG0000003130715
zic3 / zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) / Q62521* / O60481* / Zic family member 3* / zinc finger protein of the cerebellum 3*ENSDARG0000007149714
glis2a / GLIS family zinc finger 2a / GLIS2* / Q9BZE0* / GLIS family zinc finger 2*ENSDARG0000007838814
zic2a / zic family member 2 (odd-paired homolog, Drosophila), a / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000001555414
glis2b / GLIS family zinc finger 2b / GLIS2* / Q8VDL9* / Q9BZE0* / GLIS family zinc finger 2* / Zinc finger protein GLIS2 *ENSDARG0000010023214
zic5 / zic family member 5 (odd-paired homolog, Drosophila) / Q96T25* / Zic family member 5* / zinc finger protein of the cerebellum 5*ENSDARG0000001602214
zic6 / zic family member 6ENSDARG0000007149613
zic1 / zic family member 1 (odd-paired homolog, Drosophila)ENSDARG0000001556713
zic2b / zic family member 2 (odd-paired homolog, Drosophila) b / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000003717813
si:dkey-149i17.7ENSDARG000000946849


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003323 type B pancreatic cell development IMP
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0042593 glucose homeostasis IMP
 biological_processGO:1990798 pancreas regeneration IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009102 pancreatic B cell pancreatic B cell decreased amount , abnormal
pancreatic B cell decreased area , abnormal
pancreatic B cell regeneration decreased rate , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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