ENSDARG00000052131


Danio rerio

Features
Gene ID: ENSDARG00000052131
  
Biological name :gli3
  
Synonyms : gli3 / GLI family zinc finger 3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 11528270
Gene end: 11821505
  
Corresponding Affymetrix probe sets: DrAffx.2.3.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000058991
swissprot - F1QSH8
ZFIN ID - ZDB-GENE-041111-162
Ensembl - ENSDARG00000052131
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gli2a / GLI family zinc finger 2aENSDARG0000002564139
gli2b / GLI family zinc finger 2b / GLI2* / P10070* / GLI family zinc finger 2*ENSDARG0000002088432
gli1 / GLI family zinc finger 1 / P08151*ENSDARG0000010124429
glis3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSDARG0000006972612
zic4 / zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSDARG0000003130710
glis1b / GLIS family zinc finger 1b / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000002793310
glis2b / GLIS family zinc finger 2b / GLIS2* / Q8VDL9* / Q9BZE0* / GLIS family zinc finger 2* / Zinc finger protein GLIS2 *ENSDARG000001002329
zic6 / zic family member 6ENSDARG000000714969
zic2b / zic family member 2 (odd-paired homolog, Drosophila) b / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG000000371789
zic3 / zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) / Q62521* / O60481* / Zic family member 3* / zinc finger protein of the cerebellum 3*ENSDARG000000714979
zic2a / zic family member 2 (odd-paired homolog, Drosophila), a / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG000000155549
zic5 / zic family member 5 (odd-paired homolog, Drosophila) / Q96T25* / Zic family member 5* / zinc finger protein of the cerebellum 5*ENSDARG000000160229
glis1a / GLIS family zinc finger 1a / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG000000685808
glis2a / GLIS family zinc finger 2a / GLIS2* / Q9BZE0* / GLIS family zinc finger 2*ENSDARG000000783888
zic1 / zic family member 1 (odd-paired homolog, Drosophila)ENSDARG000000155678
si:dkey-149i17.7ENSDARG000000946844


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR032851  Transcription factor GLI3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated ISS
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0048568 embryonic organ development IEA
 biological_processGO:0048699 generation of neurons IMP
 biological_processGO:0050767 regulation of neurogenesis IGI
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord physical object quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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