ENSDARG00000031307


Danio rerio

Features
Gene ID: ENSDARG00000031307
  
Biological name :zic4
  
Synonyms : zic4 / zic family member 4
  
Possible biological names infered from orthology : Q61467 / Q8N9L1 / zinc finger protein of the cerebellum 4
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 4977862
Gene end: 4983423
  
Corresponding Affymetrix probe sets: Dr.22390.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000045812
Ensembl peptide - ENSDARP00000102801
NCBI entrez gene - 767673     See in Manteia.
swissprot - A7KQF2
swissprot - B2BM15
ZFIN ID - ZDB-GENE-040622-4
Ensembl - ENSDARG00000031307
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZIC4ENSGALG00000006810Gallus gallus
 ZIC4ENSG00000174963Homo sapiens
 Zic4ENSMUSG00000036972Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zic5 / zic family member 5 (odd-paired homolog, Drosophila) / Q96T25* / Zic family member 5* / zinc finger protein of the cerebellum 5*ENSDARG0000001602254
zic2a / zic family member 2 (odd-paired homolog, Drosophila), a / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000001555448
zic1 / zic family member 1 (odd-paired homolog, Drosophila)ENSDARG0000001556746
zic3 / zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) / Q62521* / O60481* / Zic family member 3* / zinc finger protein of the cerebellum 3*ENSDARG0000007149745
zic2b / zic family member 2 (odd-paired homolog, Drosophila) b / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000003717844
zic6 / zic family member 6ENSDARG0000007149638
gli3 / GLI family zinc finger 3ENSDARG0000005213129
gli2a / GLI family zinc finger 2aENSDARG0000002564128
gli1 / GLI family zinc finger 1 / P08151*ENSDARG0000010124425
gli2b / GLI family zinc finger 2b / GLI2* / P10070* / GLI family zinc finger 2*ENSDARG0000002088424
glis3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSDARG0000006972622
glis2b / GLIS family zinc finger 2b / GLIS2* / Q8VDL9* / Q9BZE0* / GLIS family zinc finger 2* / Zinc finger protein GLIS2 *ENSDARG0000010023219
glis1b / GLIS family zinc finger 1b / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000002793319
glis1a / GLIS family zinc finger 1a / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000006858019
si:dkey-149i17.7ENSDARG0000009468417
glis2a / GLIS family zinc finger 2a / GLIS2* / Q9BZE0* / GLIS family zinc finger 2*ENSDARG0000007838817


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021534 cell proliferation in hindbrain IGI
 biological_processGO:0021592 fourth ventricle development IMP
 biological_processGO:0030902 hindbrain development IMP
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000110 fourth ventricle fourth ventricle structure , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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