ENSGALG00000033245


Gallus gallus

Features
Gene ID: ENSGALG00000033245
  
Biological name :SMPD2
  
Synonyms : SMPD2 / sphingomyelin phosphodiesterase 2
  
Possible biological names infered from orthology : O60906 / O70572 / sphingomyelin phosphodiesterase 2, neutral
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 32035
Gene end: 35482
  
Corresponding Affymetrix probe sets: Gga.11867.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053595
Ensembl peptide - ENSGALP00000063316
Ensembl peptide - ENSGALP00000061386
NCBI entrez gene - 770663     See in Manteia.
RefSeq - XM_001232515
RefSeq - XM_004934785
RefSeq - XM_015298760
RefSeq - XM_015298761
swissprot - A0A1L1RRF0
swissprot - A0A1D5PL80
Ensembl - ENSGALG00000033245
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smpd2aENSDARG00000040523Danio rerio
 smpd2bENSDARG00000052701Danio rerio
 SMPD2ENSG00000135587Homo sapiens
 Smpd2ENSMUSG00000019822Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005135  Endonuclease/exonuclease/phosphatase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004767 sphingomyelin phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
TNFR1-mediated ceramide production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000000122 GNB2L1 / P63247 / Receptor of activated protein C kinase 1 / RACK1* / P68040* / P63244* / receptor for activated C kinase 1* / Receptor of activated protein C kinase 1 Receptor of activate...  / reaction / complex
 ENSGALG00000038838 NSMAF / neutral sphingomyelinase activation associated factor / O35242* / Q92636* / neutral sphingomyelinase (N-SMase) activation associated factor*  / complex / reaction






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr