ENSGALG00000034107


Gallus gallus

Features
Gene ID: ENSGALG00000034107
  
Biological name :TRIM63
  
Synonyms : TRIM63 / tripartite motif containing 63
  
Possible biological names infered from orthology : Q969Q1
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 3220329
Gene end: 3225445
  
Corresponding Affymetrix probe sets: Gga.12362.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047901
Ensembl peptide - ENSGALP00000063654
NCBI entrez gene - 426754     See in Manteia.
RefSeq - XM_015297755
RefSeq - XM_015297754
swissprot - A0A1L1RXT1
swissprot - A0A1D5P5D3
Ensembl - ENSGALG00000034107
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim63aENSDARG00000028027Danio rerio
 trim63bENSDARG00000086685Danio rerio
 Q969Q1ENSG00000158022Homo sapiens
 Trim63ENSMUSG00000028834Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM55 / tripartite motif-containing protein 55 / Q9BYV6* / tripartite motif containing 55*ENSGALG0000004132755
TRIM54 / tripartite motif containing 54 / Q9BYV2* / Q9ERP3* / Tripartite motif-containing protein 54 *ENSGALG0000003320354
TRIM36 / tripartite motif containing 36 / Q80WG7* / Q9NQ86* / E3 ubiquitin-protein ligase Trim36 *ENSGALG0000000818828
MID2 / midline 2 / Q9UJV3* / Mus musculus midline 2 (Mid2), transcript variant 2, mRNA.*ENSGALG0000000386026
MID1 / E3 ubiquitin-protein ligase Midline-1 / O15344* / O70583* / midline 1*ENSGALG0000003850426
TRIM9 / tripartite motif containing 9 / Q8C7M3* / Q9C026* / E3 ubiquitin-protein ligase TRIM9 *ENSGALG0000001236725
TRIM67 / tripartite motif containing 67 / Q505D9* / Q6ZTA4* / Tripartite motif-containing protein 67 *ENSGALG0000003096014
FSD1L / fibronectin type III and SPRY domain containing 1 like / Q8BYN5* / Q9BXM9* / Mus musculus fibronectin type III and SPRY domain containing 1-like (Fsd1l), transcript variant 3, mRNA.*ENSGALG0000001544212
FSD1* / Q7TPM6* / Q9BTV5* / fibronectin type III and SPRY domain containing 1* / Fibronectin type III and SPRY domain-containing protein 1 *ENSGALG000000329380


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR003649  B-box, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0031432 titin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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