ENSGALG00000037352


Gallus gallus

Features
Gene ID: ENSGALG00000037352
  
Biological name :SOX14
  
Synonyms : Q9W7R6 / SOX14 / Transcription factor SOX-14
  
Possible biological names infered from orthology : O95416 / Q04892 / SRY-box 14
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 4201229
Gene end: 4202185
  
Corresponding Affymetrix probe sets: Gga.286.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048810
NCBI entrez gene - 395526     See in Manteia.
RefSeq - NM_204761
RefSeq Peptide - NP_990092
swissprot - Q9W7R6
Ensembl - ENSGALG00000037352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sox14ENSDARG00000070929Danio rerio
 SOX14ENSG00000168875Homo sapiens
 Sox14ENSMUSG00000053747Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SOX21 / Q9W7R5 / Transcription factor SOX-21 / Q9Y651* / Q811W0* / SRY-box 21*ENSGALG0000003515768
SOX1 / transcription factor SOX-1 / O00570* / P53783* / SRY-box 1*ENSGALG0000003035344
SOX2 / P48430 / Transcription factor SOX-2 / P48431* / SRY-box 2*ENSGALG0000004346044
SOX8 / transcription factor SOX-8 / Q04886* / P57073* / SRY-box 8* / SRY (sex determining region Y)-box 8*ENSGALG0000000526330
SOX17 / transcription factor SOX-17 / Q61473* / Q9H6I2* / SRY-box 17*ENSGALG0000003285129
SOX17* / Q61473* / Q9H6I2* / SRY-box 17* / Transcription factor SOX-17 *ENSGALG0000003299429
SOX9 / P48434 / Transcription factor SOX-9 / Q04887* / P48436* / SRY-box 9*ENSGALG0000000438628
SOX4 / transcription factor SOX-4 / Q06831* / Q06945* / SRY-box 4*ENSGALG0000003649727
SOX10 / Q9W757 / Transcription factor SOX-10 / Q04888* / P56693* / SRY-box 10*ENSGALG0000001229027
SOX7* / Q9BT81* / P40646* / SRY-box 7* / AC105001.2* / SRY (sex determining region Y)-box 7*ENSGALG0000004129625
SOX18 / transcription factor SOX-18 / P35713* / P43680* / SRY-box 18*ENSGALG0000003411824
SOX12 / SRY-box 12 / O15370* / Q04890* / Transcription factor SOX-12 *ENSGALG0000003595123


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR022097  Transcription factor SOX


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0009649 entrainment of circadian clock IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:2001222 regulation of neuron migration IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0044798 nuclear transcription factor complex IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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