ENSGALG00000039040


Gallus gallus

Features
Gene ID: ENSGALG00000039040
  
Biological name :PAX1
  
Synonyms : paired box 1 / PAX1
  
Possible biological names infered from orthology : P09084 / P15863 / Paired box protein Pax-1
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 3491081
Gene end: 3494823
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000056099
NCBI entrez gene - 100859138     See in Manteia.
RefSeq - XM_015283428
swissprot - A0A1D5PT57
Ensembl - ENSGALG00000039040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pax1aENSDARG00000008203Danio rerio
 pax1bENSDARG00000073814Danio rerio
 PAX1ENSG00000125813Homo sapiens
 Pax1ENSMUSG00000037034Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PAX9 / paired box protein Pax-9 / P47242* / P55771* / paired box 9*ENSGALG0000001011461
PAX5 / paired box 5 / Q02548* / Q02650* / Paired box protein Pax-5 *ENSGALG0000001643137
PAX7 / paired box 7 / P23759* / P47239* / Paired box protein Pax-7 *ENSGALG0000004320437
PAX2 / paired box 2 / Q02962*ENSGALG0000000568937
PAX6 / paired box 6 / P26367* / P63015* / Paired box protein Pax-6 *ENSGALG0000001212333
PAX3 / paired box protein Pax-3 / P23760* / P24610* / paired box 3*ENSGALG0000003094414


Protein motifs (from Interpro)
Interpro ID Name
 IPR001523  Paired domain
 IPR009057  Homeobox-like domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0043367 CD4-positive, alpha-beta T cell differentiation IEA
 biological_processGO:0043374 CD8-positive, alpha-beta T cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048538 thymus development IEA
 biological_processGO:0060017 parathyroid gland development IEA
 biological_processGO:0060349 bone morphogenesis IEA
 biological_processGO:0061056 sclerotome development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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