ENSDARG00000008203


Danio rerio

Features
Gene ID: ENSDARG00000008203
  
Biological name :pax1a
  
Synonyms : paired box 1a / pax1a
  
Possible biological names infered from orthology : P09084 / P15863 / paired box 1 / Paired box protein Pax-1 / PAX1
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 42274240
Gene end: 42278340
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000023546
Ensembl peptide - ENSDARP00000116456
NCBI entrez gene - 564359     See in Manteia.
RefSeq - NM_001080592
RefSeq Peptide - NP_001074061
swissprot - E9QBN7
swissprot - A0A0R4IKL3
swissprot - F1QRF4
ZFIN ID - ZDB-GENE-070112-182
Ensembl - ENSDARG00000008203
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAX1ENSGALG00000039040Gallus gallus
 PAX1ENSG00000125813Homo sapiens
 Pax1ENSMUSG00000037034Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pax1b / paired box 1b / PAX1* / P15863* / P09084* / paired box 1* / Paired box protein Pax-1 *ENSDARG0000007381472
pax9 / paired box 9 / P47242* / P55771* / Paired box protein Pax-9 *ENSDARG0000005382958
pax2a / Q90268 / paired box 2a / PAX2* / Q02962* / paired box 2*ENSDARG0000002814837
pax2b / paired box 2b / PAX2* / Q02962* / paired box 2*ENSDARG0000003257837
pax5 / paired box 5 / Q02548* / Q02650* / Paired box protein Pax-5 *ENSDARG0000003738336
pax7a / paired box 7a / PAX7* / P23759* / paired box 7*ENSDARG0000010039835
pax3a / paired box 3a / PAX3* / P23760* / P24610* / paired box 3*ENSDARG0000001019235
pax7b / paired box 7b / PAX7* / P47239* / P23759* / paired box 7* / Paired box protein Pax-7 *ENSDARG0000007081834
pax8 / paired box 8 / Q06710*ENSDARG0000001587934
pax3b / paired box 3b / PAX3* / P23760* / paired box 3*ENSDARG0000002834832
pax6a / P26630 / paired box 6aENSDARG0000010337931
pax6b / paired box 6bENSDARG0000004593631
pax4 / paired box 4 / O43316* / P32115*ENSDARG0000002133625


Protein motifs (from Interpro)
Interpro ID Name
 IPR001523  Paired domain
 IPR009057  Homeobox-like domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR033206  Paired box protein PAX1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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