ENSDARG00000070818


Danio rerio

Features
Gene ID: ENSDARG00000070818
  
Biological name :pax7b
  
Synonyms : paired box 7b / pax7b
  
Possible biological names infered from orthology : P23759 / P47239 / paired box 7 / Paired box protein Pax-7 / PAX7
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 20863145
Gene end: 20936845
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000108935
Ensembl peptide - ENSDARP00000130205
NCBI entrez gene - 566533     See in Manteia.
RefSeq - NM_001146149
RefSeq Peptide - NP_001139621
swissprot - C0M005
swissprot - A0A0R4I9M5
swissprot - F6P0K3
ZFIN ID - ZDB-GENE-080917-54
Ensembl - ENSDARG00000070818
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAX7ENSGALG00000043204Gallus gallus
 PAX7ENSG00000009709Homo sapiens
 Pax7ENSMUSG00000028736Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pax7a / paired box 7a / PAX7* / P23759* / paired box 7*ENSDARG0000010039892
pax3a / paired box 3a / PAX3* / P23760* / P24610* / paired box 3*ENSDARG0000001019267
pax3b / paired box 3b / PAX3* / P23760* / paired box 3*ENSDARG0000002834860
pax6a / P26630 / paired box 6aENSDARG0000010337933
pax6b / paired box 6bENSDARG0000004593632
pax2b / paired box 2b / PAX2* / Q02962* / paired box 2*ENSDARG0000003257828
pax2a / Q90268 / paired box 2a / PAX2* / Q02962* / paired box 2*ENSDARG0000002814828
pax8 / paired box 8 / Q06710*ENSDARG0000001587928
pax9 / paired box 9 / P47242* / P55771* / Paired box protein Pax-9 *ENSDARG0000005382926
pax5 / paired box 5 / Q02548* / Q02650* / Paired box protein Pax-5 *ENSDARG0000003738326
pax1a / paired box 1a / PAX1* / P15863* / paired box 1*ENSDARG0000000820324
pax1b / paired box 1b / PAX1* / P15863* / P09084* / paired box 1* / Paired box protein Pax-1 *ENSDARG0000007381424
pax4 / paired box 4 / O43316* / P32115*ENSDARG0000002133621


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001523  Paired domain
 IPR003654  OAR domain
 IPR009057  Homeobox-like domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR017970  Homeobox, conserved site
 IPR022106  Paired box protein 7, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0042060 wound healing IGI
 biological_processGO:0050938 regulation of xanthophore differentiation IGI
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005147 regenerating tissue regenerating tissue muscle cell absent , abnormal
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 ZFA:0009291 muscle precursor cell muscle precursor cell absent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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