ENSGALG00000039710


Gallus gallus

Features
Gene ID: ENSGALG00000039710
  
Biological name :HDAC7
  
Synonyms : HDAC7 / histone deacetylase 7
  
Possible biological names infered from orthology : Q8C2B3 / Q8WUI4
  
Species: Gallus gallus
  
Chr. number: 33
Strand: 1
Band:
Gene start: 384337
Gene end: 425001
  
Corresponding Affymetrix probe sets: Gga.6133.1.S1_s_at (Chicken Array)   GgaAffx.21903.1.S1_s_at (Chicken Array)   GgaAffx.3.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050035
NCBI entrez gene - 426885     See in Manteia.
RefSeq - XM_015300246
RefSeq - NM_001031402
RefSeq - XM_015300244
RefSeq - XM_015300245
RefSeq - XM_015300236
RefSeq - XM_015300237
RefSeq - XM_015300238
RefSeq - XM_015300239
RefSeq - XM_015300240
RefSeq - XM_015300241
RefSeq - XM_015300242
RefSeq - XM_015300243
RefSeq Peptide - NP_001026573
swissprot - A0A1D5PBB1
Ensembl - ENSGALG00000039710
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01074076.1ENSDARG00000105179Danio rerio
 hdac7bENSDARG00000073850Danio rerio
 HDAC7ENSG00000061273Homo sapiens
 Hdac7ENSMUSG00000022475Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HDAC4 / P83038 / Histone deacetylase 4 / P56524* / Q6NZM9*ENSGALG0000000428855
HDAC9 / histone deacetylase 9 / Q9UKV0*ENSGALG0000001085447
HDAC10 / histone deacetylase 10 / Q6P3E7* / Q969S8*ENSGALG000000412518


Protein motifs (from Interpro)
Interpro ID Name
 IPR000286  Histone deacetylase family
 IPR023801  Histone deacetylase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001570 vasculogenesis IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007043 cell-cell junction assembly IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0032703 negative regulation of interleukin-2 production IEA
 biological_processGO:0045668 negative regulation of osteoblast differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0070932 histone H3 deacetylation IEA
 biological_processGO:0090050 positive regulation of cell migration involved in sprouting angiogenesis IEA
 biological_processGO:1901223 negative regulation of NIK/NF-kappaB signaling IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0004407 histone deacetylase activity IEA
 molecular_functionGO:0005080 protein kinase C binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
 molecular_functionGO:0033613 activating transcription factor binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070491 repressing transcription factor binding IEA
 molecular_functionGO:0071889 14-3-3 protein binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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