ENSGALG00000041251


Gallus gallus

Features
Gene ID: ENSGALG00000041251
  
Biological name :HDAC10
  
Synonyms : HDAC10 / histone deacetylase 10
  
Possible biological names infered from orthology : Q6P3E7 / Q969S8
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 20329726
Gene end: 20343807
  
Corresponding Affymetrix probe sets: Gga.13995.1.S1_s_at (Chicken Array)   GgaAffx.22654.1.S1_at (Chicken Array)   GgaAffx.5451.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054286
NCBI entrez gene - 417742     See in Manteia.
RefSeq - XM_015274810
RefSeq - XM_015274859
RefSeq - XM_015274906
RefSeq - XM_015274979
RefSeq - XM_015274779
swissprot - A0A1D5PN47
Ensembl - ENSGALG00000041251
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hdac10ENSDARG00000086458Danio rerio
 HDAC10ENSG00000100429Homo sapiens
 Hdac10ENSMUSG00000062906Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HDAC4 / P83038 / Histone deacetylase 4 / P56524* / Q6NZM9*ENSGALG0000000428815
HDAC9 / histone deacetylase 9 / Q9UKV0*ENSGALG0000001085415
HDAC7 / histone deacetylase 7 / Q8C2B3* / Q8WUI4*ENSGALG0000003971011


Protein motifs (from Interpro)
Interpro ID Name
 IPR000286  Histone deacetylase family
 IPR023801  Histone deacetylase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006476 protein deacetylation IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0070932 histone H3 deacetylation IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004407 histone deacetylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
 molecular_functionGO:0033558 protein deacetylase activity IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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