ENSGALG00000039830


Gallus gallus

Features
Gene ID: ENSGALG00000039830
  
Biological name :DHX30
  
Synonyms : DHX30 / putative ATP-dependent RNA helicase DHX30 precursor
  
Possible biological names infered from orthology : DExH-box helicase 30 / Putative ATP-dependent RNA helicase DHX30 / Q7L2E3 / Q99PU8
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 712649
Gene end: 737788
  
Corresponding Affymetrix probe sets: Gga.2762.1.S1_s_at (Chicken Array)   GgaAffx.3132.1.S1_at (Chicken Array)   GgaAffx.3132.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052671
NCBI entrez gene - 420376     See in Manteia.
RefSeq - XM_015281066
RefSeq - NM_001012851
RefSeq - XM_015281064
RefSeq - XM_015281065
RefSeq - XM_015281062
RefSeq - XM_015281063
RefSeq Peptide - NP_001012869
swissprot - A0A1D5PIN7
Ensembl - ENSGALG00000039830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhx30ENSDARG00000077839Danio rerio
 DHX30ENSG00000132153Homo sapiens
 Dhx30ENSMUSG00000032480Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DHX57 / DExH-box helicase 57 / Q6P158* / Q6P5D3* / Putative ATP-dependent RNA helicase DHX57 *ENSGALG0000004155826
DHX29 / DExH-box helicase 29 / Q6PGC1* / Q7Z478* / ATP-dependent RNA helicase DHX29 *ENSGALG0000001470024
DHX36 / DEAH-box helicase 36 / Q8VHK9* / Q9H2U1* / ATP-dependent RNA helicase DHX36 *ENSGALG0000004308223
TDRD9 / tudor domain containing 9 / Q14BI7* / Q8NDG6* / ATP-dependent RNA helicase TDRD9 *ENSGALG0000001156517
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG0000000018915
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG000000296818


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014720  Double-stranded RNA-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1902775 mitochondrial large ribosomal subunit assembly IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0035770 ribonucleoprotein granule IEA
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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