ENSDARG00000077839


Danio rerio

Features
Gene ID: ENSDARG00000077839
  
Biological name :dhx30
  
Synonyms : DEAH (Asp-Glu-Ala-His) box helicase 30 / dhx30
  
Possible biological names infered from orthology : DExH-box helicase 30 / Putative ATP-dependent RNA helicase DHX30 / Q7L2E3 / Q99PU8
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 212059
Gene end: 232977
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101025
NCBI entrez gene - 570735     See in Manteia.
RefSeq - XM_005171083
RefSeq - XM_021466536
RefSeq - XM_694247
swissprot - E7FCG0
ZFIN ID - ZDB-GENE-130530-833
Ensembl - ENSDARG00000077839
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHX30ENSGALG00000039830Gallus gallus
 DHX30ENSG00000132153Homo sapiens
 Dhx30ENSMUSG00000032480Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhx57 / DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 / Q6P158* / Q6P5D3* / DExH-box helicase 57* / Putative ATP-dependent RNA helicase DHX57 *ENSDARG0000005766026
dhx29 / DEAH (Asp-Glu-Ala-His) box polypeptide 29 / Q7Z478* / DExH-box helicase 29*ENSDARG0000004032625
dhx36 / DEAH (Asp-Glu-Ala-His) box polypeptide 36 / Q9H2U1* / DEAH-box helicase 36*ENSDARG0000010105924
dhx9 / DEAH (Asp-Glu-Ala-His) box helicase 9 / Q08211* / DExH-box helicase 9*ENSDARG0000007972524
LO017790.1 / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSDARG0000010352521
tdrd9 / B8A4F4 / tudor domain containing 9 / Q14BI7* / Q8NDG6* / ATP-dependent RNA helicase TDRD9 *ENSDARG0000001345317


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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