ENSGALG00000000189


Gallus gallus

Features
Gene ID: ENSGALG00000000189
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : B2RR83 / Q9H6S0 / YTHDC2 / YTH domain containing 2
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 45718092
Gene end: 45739382
  
Corresponding Affymetrix probe sets: GgaAffx.121.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000246
swissprot - F1NS70
Ensembl - ENSGALG00000000189
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO017790.1ENSDARG00000103525Danio rerio
 Q9H6S0ENSG00000047188Homo sapiens
 B2RR83ENSMUSG00000034653Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DHX57 / DExH-box helicase 57 / Q6P158* / Q6P5D3* / Putative ATP-dependent RNA helicase DHX57 *ENSGALG0000004155829
DHX29 / DExH-box helicase 29 / Q6PGC1* / Q7Z478* / ATP-dependent RNA helicase DHX29 *ENSGALG0000001470026
DHX36 / DEAH-box helicase 36 / Q8VHK9* / Q9H2U1* / ATP-dependent RNA helicase DHX36 *ENSGALG0000004308225
DHX30 / putative ATP-dependent RNA helicase DHX30 precursor / Q99PU8* / Q7L2E3* / DExH-box helicase 30* / Putative ATP-dependent RNA helicase DHX30 *ENSGALG0000003983025
TDRD9 / tudor domain containing 9 / Q14BI7* / Q8NDG6* / ATP-dependent RNA helicase TDRD9 *ENSGALG0000001156518
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG000000296810


Protein motifs (from Interpro)
Interpro ID Name
 IPR001374  R3H domain
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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