ENSGALG00000014700


Gallus gallus

Features
Gene ID: ENSGALG00000014700
  
Biological name :DHX29
  
Synonyms : DExH-box helicase 29 / DHX29
  
Possible biological names infered from orthology : ATP-dependent RNA helicase DHX29 / Q6PGC1 / Q7Z478
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 16737588
Gene end: 16761324
  
Corresponding Affymetrix probe sets: Gga.12357.1.S1_at (Chicken Array)   GgaAffx.9329.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023654
NCBI entrez gene - 427136     See in Manteia.
RefSeq - XM_015277570
swissprot - E1C388
Ensembl - ENSGALG00000014700
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhx29ENSDARG00000040326Danio rerio
 DHX29ENSG00000067248Homo sapiens
 Dhx29ENSMUSG00000042426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DHX57 / DExH-box helicase 57 / Q6P158* / Q6P5D3* / Putative ATP-dependent RNA helicase DHX57 *ENSGALG0000004155829
DHX36 / DEAH-box helicase 36 / Q8VHK9* / Q9H2U1* / ATP-dependent RNA helicase DHX36 *ENSGALG0000004308225
DHX30 / putative ATP-dependent RNA helicase DHX30 precursor / Q99PU8* / Q7L2E3* / DExH-box helicase 30* / Putative ATP-dependent RNA helicase DHX30 *ENSGALG0000003983021
TDRD9 / tudor domain containing 9 / Q14BI7* / Q8NDG6* / ATP-dependent RNA helicase TDRD9 *ENSGALG0000001156517
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG0000000018914
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG000000296818


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0045948 positive regulation of translational initiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003724 RNA helicase activity IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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