ENSG00000067248


Homo sapiens

Features
Gene ID: ENSG00000067248
  
Biological name :DHX29
  
Synonyms : DExH-box helicase 29 / DHX29 / Q7Z478
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q11.2
Gene start: 55256245
Gene end: 55307722
  
Corresponding Affymetrix probe sets: 212648_at (Human Genome U133 Plus 2.0 Array)   212649_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000481966
Ensembl peptide - ENSP00000251636
Ensembl peptide - ENSP00000421435
NCBI entrez gene - 54505     See in Manteia.
OMIM - 612720
RefSeq - XM_017009588
RefSeq - NM_019030
RefSeq - XM_006714653
RefSeq Peptide - NP_061903
swissprot - Q7Z478
swissprot - H0Y8L1
swissprot - A0A087WYN9
Ensembl - ENSG00000067248
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhx29ENSDARG00000040326Danio rerio
 DHX29ENSGALG00000014700Gallus gallus
 Dhx29ENSMUSG00000042426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DHX57 / Q6P158 / DExH-box helicase 57ENSG0000016321430
DHX36 / Q9H2U1 / DEAH-box helicase 36ENSG0000017495326
Q9H6S0 / YTHDC2 / YTH domain containing 2ENSG0000004718824
DHX9 / Q08211 / DExH-box helicase 9ENSG0000013582924
DHX30 / Q7L2E3 / DExH-box helicase 30ENSG0000013215323
TDRD9 / Q8NDG6 / tudor domain containing 9ENSG0000015641418


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR034730  ATP-dependent RNA helicase DHX29


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0045948 positive regulation of translational initiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003724 RNA helicase activity IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IDA
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr