ENSGALG00000040519


Gallus gallus

Features
Gene ID: ENSGALG00000040519
  
Biological name :PEF1
  
Synonyms : PEF1 / penta-EF-hand domain containing 1
  
Possible biological names infered from orthology : Peflin / Q8BFY6 / Q9UBV8
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 4980932
Gene end: 4982596
  
Corresponding Affymetrix probe sets: GgaAffx.2027.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047759
NCBI entrez gene - 419644     See in Manteia.
RefSeq - XM_417792
swissprot - A0A1D5P4Z5
Ensembl - ENSGALG00000040519
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pef1ENSDARG00000023989Danio rerio
 PEF1ENSG00000162517Homo sapiens
 Pef1ENSMUSG00000028779Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDCD6 / programmed cell death 6 / O75340* / P12815* / Programmed cell death protein 6 *ENSGALG0000001340034
SRI / sorcin / P30626* / Q6P069*ENSGALG0000000898531
CAPNS2 / calpain small subunit 2 / Q96L46* / Q9D7J7*ENSGALG0000004505023
ENSGALG0000001113617


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0014029 neural crest formation IEA
 biological_processGO:0014032 neural crest cell development IEA
 biological_processGO:0048208 COPII vesicle coating IEA
 biological_processGO:0051592 response to calcium ion IEA
 biological_processGO:1902527 positive regulation of protein monoubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030127 COPII vesicle coat IEA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA
 molecular_functionGO:0060090 molecular adaptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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