ENSMUSG00000028779


Mus musculus

Features
Gene ID: ENSMUSG00000028779
  
Biological name :Pef1
  
Synonyms : Pef1 / Peflin / Q8BFY6
  
Possible biological names infered from orthology : penta-EF-hand domain containing 1 / Q9UBV8
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 130102558
Gene end: 130128135
  
Corresponding Affymetrix probe sets: 10508608 (MoGene1.0st)   1448644_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030563
Ensembl peptide - ENSMUSP00000112638
NCBI entrez gene - 67898     See in Manteia.
MGI - MGI:1915148
RefSeq - NM_026441
RefSeq Peptide - NP_080717
swissprot - Q8BFY6
Ensembl - ENSMUSG00000028779
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pef1ENSDARG00000023989Danio rerio
 PEF1ENSGALG00000040519Gallus gallus
 PEF1ENSG00000162517Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pdcd6 / P12815 / Programmed cell death protein 6 / O75340* / programmed cell death 6*ENSMUSG0000002157628
Gca / Q8VC88 / Grancalcin / P28676*ENSMUSG0000002689327
Sri / Q6P069 / Sorcin / P30626*ENSMUSG0000000316127
Capns1 / calpain small subunit 1 / P04632*ENSMUSG0000000179421
Capns2 / Q9D7J7 / Calpain small subunit 2 / Q96L46*ENSMUSG0000007814419


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport ISS
 biological_processGO:0014029 neural crest formation ISO
 biological_processGO:0014032 neural crest cell development ISS
 biological_processGO:0048208 COPII vesicle coating ISO
 biological_processGO:0051592 response to calcium ion ISO
 biological_processGO:1902527 positive regulation of protein monoubiquitination ISO
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030127 COPII vesicle coat ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex ISO
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity ISO
 molecular_functionGO:0046983 protein dimerization activity ISO
 molecular_functionGO:0048306 calcium-dependent protein binding ISO
 molecular_functionGO:0060090 molecular adaptor activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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