ENSGALG00000041104


Gallus gallus

Features
Gene ID: ENSGALG00000041104
  
Biological name :USP20
  
Synonyms : ubiquitin specific peptidase 20 / USP20
  
Possible biological names infered from orthology : Q8C6M1 / Q9Y2K6
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 6174374
Gene end: 6191450
  
Corresponding Affymetrix probe sets: Gga.12871.1.S1_s_at (Chicken Array)   GgaAffx.2569.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049159
Ensembl peptide - ENSGALP00000057569
NCBI entrez gene - 417188     See in Manteia.
RefSeq - XM_015279718
RefSeq - XM_015279717
swissprot - A0A1D5PX75
swissprot - A0A1D5P8W0
Ensembl - ENSGALG00000041104
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp20ENSDARG00000027501Danio rerio
 USP20ENSG00000136878Homo sapiens
 Usp20ENSMUSG00000026854Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP33 / ubiquitin specific peptidase 33 / Q8R5K2* / Q8TEY7*ENSGALG0000000897455
USP8 / ubiquitin specific peptidase 8 / P40818* / Q80U87*ENSGALG0000000589415
USP16 / ubiquitin specific peptidase 16 / Q99LG0* / Q9Y5T5*ENSGALG0000001581314
USP2 / ubiquitin specific peptidase 2 / O75604* / O88623*ENSGALG0000000675513
USP45* / Q70EL2* / Q8K387* / ubiquitin specific petidase 45* / ubiquitin specific peptidase 45*ENSGALG0000003181410
USP45 / Q70EL2* / Q8K387* / ubiquitin specific petidase 45* / ubiquitin specific peptidase 45*ENSGALG000000154784


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR001607  Zinc finger, UBP-type
 IPR006615  Peptidase C19, ubiquitin-specific peptidase, DUSP domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0008277 regulation of G-protein coupled receptor protein signaling pathway IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0070536 protein K63-linked deubiquitination IEA
 biological_processGO:0071108 protein K48-linked deubiquitination IEA
 cellular_componentGO:0005813 centrosome IEA
 molecular_functionGO:0001664 G-protein coupled receptor binding IEA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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